RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 GRSF1Q12849 480 aaKnown RBP eCLIP10.82□□□□□ -0.68
RTN3-208ENST00000537981 SLC36A3Q495N2 470 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 TWF2Q6IBS0 349 aaKnown RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 LAYNQ6UX15 382 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 SPNS2Q8IVW8 549 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 PGAM4Q8N0Y7 254 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 CELF2-AS1Q8N7Q2 184 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 ASCC1Q8N9N2 400 aaKnown RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 PSMA8Q8TAA3 256 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 NDNFQ8TB73 568 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 DLG3Q92796 817 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 FKBP10Q96AY3 582 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 NARFLQ9H6Q4 476 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 TCF7L2Q9NQB0 619 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 ABCB10Q9NRK6 738 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 ZC3H7BQ9UGR2 993 aaKnown RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 VAV3Q9UKW4 847 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 TMCC3Q9ULS5 477 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 CYP3A7-CYP3A51PA0A087WV96 503 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 TCAF2A6NFQ2 919 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 C3orf70A6NLC5 250 aaPredicted RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 hCG_1984214I3L0E3 225 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 MSH4O15457 936 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 ASNA1O43681 348 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 NOL3O60936 208 aaKnown RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 MT-ND1P03886 318 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 SERPINE1P05121 402 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 ALOX5P09917 674 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 TFE3P19532 575 aaPredicted RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 GARTP22102 1010 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 ZNF76P36508 570 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 GABRB2P47870 512 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 LIG4P49917 911 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 ARPP19P56211 112 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 PAPPAQ13219 1627 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 SERINC3Q13530 473 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 TFDP3Q5H9I0 405 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 C6orf10Q5SRN2 563 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 NHSQ6T4R5 1651 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 UNC5AQ6ZN44 842 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 SLCO6A1Q86UG4 719 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 SBF2Q86WG5 1849 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 HDAC11Q96DB2 347 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 MCEEQ96PE7 176 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 DHRS9Q9BPW9 319 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 TARS2Q9BW92 718 aaKnown RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 FUNDC2Q9BWH2 189 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 PDGFDQ9GZP0 370 aaPredicted RBP10.82□□□□□ -0.68
RTN3-208ENST00000537981 PSAT1Q9Y617 370 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 MAU2Q9Y6X3 613 aa10.82□□□□□ -0.68
RTN3-208ENST00000537981 PABPN1LA6NDY0 278 aaKnown RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 CENPBD1B2RD01 187 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 K7ENM7 598 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 RFPL2O75678 378 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 SEC14L2O76054 403 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 SNAP29O95721 258 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 SERPINB1P30740 379 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 LEPRP48357 1165 aaKnown RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 GNG2P59768 71 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 CRADDP78560 199 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 RHDQ02161 417 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 ART3Q13508 389 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 POLD3Q15054 466 aaPredicted RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 STK11Q15831 433 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 NFIL3Q16649 462 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 DESI1Q6ICB0 168 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 ALKBH2Q6NS38 261 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 KIAA0408Q6ZU52 694 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 CAND1Q86VP6 1230 aaKnown RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 THNSL1Q8IYQ7 743 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 RCOR2Q8IZ40 523 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 GIMAP1Q8WWP7 306 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 TRIM8Q9BZR9 551 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 KMT5AQ9NQR1 393 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 HSPBP1Q9NZL4 362 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 SEPT3Q9UH03 358 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 CCNL1Q9UK58 526 aaPredicted RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 NAV1Q8NEY1 1877 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 TOGARAM1Q9Y4F4 1720 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 H0YJX3 145 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 GPR25O00155 361 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 PDHXO00330 501 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 DYRK3O43781 588 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 CPNE6O95741 557 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 DLGAP3O95886 979 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 SCGB1D2O95969 90 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 CCDC159P0C7I6 412 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 RALBP11234 206 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 ATP6V1B2P21281 511 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 NOS2P35228 1153 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 ABCG1P45844 678 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 TMBIM6P55061 237 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 POU6F2P78424 691 aaPredicted RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 IKQ13123 557 aaPredicted RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 CMC1Q7Z7K0 106 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 ARMC8Q8IUR7 673 aa10.81□□□□□ -0.68
RTN3-208ENST00000537981 PLD6Q8N2A8 252 aaKnown RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 ZCCHC7Q8N3Z6 543 aaKnown RBP10.81□□□□□ -0.68
RTN3-208ENST00000537981 FAM83FQ8NEG4 500 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms