RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 ZNF235Q14590 738 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 FASTKD3Q14CZ7 662 aaKnown RBP11.89□□□□□ -0.51
SPARC-207ENST00000537849 GEN1Q17RS7 908 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 BBS9Q3SYG4 887 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 DGKKQ5KSL6 1271 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 HP1BP3Q5SSJ5 553 aaPredicted RBP11.89□□□□□ -0.51
SPARC-207ENST00000537849 MBLAC2Q68D91 279 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 MTSS1LQ765P7 747 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 YAF2Q8IY57 180 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 BBS5Q8N3I7 341 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 OR52K1Q8NGK4 314 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 C9orf72Q96LT7 481 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 PPP1R2P1Q96PQ5 205 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 TRMT61BQ9BVS5 477 aaKnown RBP11.89□□□□□ -0.51
SPARC-207ENST00000537849 POLR1EQ9GZS1 481 aaKnown RBP11.89□□□□□ -0.51
SPARC-207ENST00000537849 PABPC3Q9H361 631 aaKnown RBP11.89□□□□□ -0.51
SPARC-207ENST00000537849 CDC42EP4Q9H3Q1 356 aaKnown RBP11.89□□□□□ -0.51
SPARC-207ENST00000537849 LRRC40Q9H9A6 602 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 VIPAS39Q9H9C1 493 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 ARNT2Q9HBZ2 717 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 NOD2Q9HC29 1040 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 VPS45Q9NRW7 570 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 TTLL3Q9Y4R7 772 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 NFS1Q9Y697 457 aa11.89□□□□□ -0.51
SPARC-207ENST00000537849 LOC285095A0A1B0GVY8 99 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 INSIG1O15503 277 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 RIPK2O43353 540 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 USP12O75317 370 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 PMPCBO75439 489 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 SRCP12931 536 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 GDI1P31150 447 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 GJA4P35212 333 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 OPRD1P41143 372 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 ELK3P41970 407 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 CSNK1DP48730 415 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 NPY2RP49146 381 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 DGKGP49619 791 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 SERPINH1P50454 418 aaKnown RBP11.88□□□□□ -0.51
SPARC-207ENST00000537849 VASPP50552 380 aaPredicted RBP11.88□□□□□ -0.51
SPARC-207ENST00000537849 GEMIN4P57678 1058 aaKnown RBP11.88□□□□□ -0.51
SPARC-207ENST00000537849 ECT2LQ008S8 904 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 SULT2A1Q06520 285 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 MSLNQ13421 630 aaPredicted RBP11.88□□□□□ -0.51
SPARC-207ENST00000537849 MTM1Q13496 603 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 SLC29A2Q14542 456 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 SLC14A2Q15849 920 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 ALS2CLQ60I27 953 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 NCEH1Q6PIU2 408 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 SRLQ86TD4 932 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 ANKMY2Q8IV38 441 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 MPP5Q8N3R9 675 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 PHTF2Q8N3S3 785 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 VOPP1Q96AW1 172 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 ISG20Q96AZ6 181 aaKnown RBP11.88□□□□□ -0.51
SPARC-207ENST00000537849 CHFRQ96EP1 664 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 RPL10LQ96L21 214 aaKnown RBP11.88□□□□□ -0.51
SPARC-207ENST00000537849 MRGPRX3Q96LB0 322 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 NUDCD1Q96RS6 583 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 TBL1YQ9BQ87 522 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 APOL2Q9BQE5 337 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 CINPQ9BW66 212 aaPredicted RBP11.88□□□□□ -0.51
SPARC-207ENST00000537849 PLAC1Q9HBJ0 212 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 LRRC4CQ9HCJ2 640 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 GTSE1Q9NYZ3 720 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 SLCO3A1Q9UIG8 710 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 ERVW-1Q9UQF0 538 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 HS3ST2Q9Y278 367 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 FCF1Q9Y324 198 aaKnown RBP11.88□□□□□ -0.51
SPARC-207ENST00000537849 NUMBLQ9Y6R0 609 aa11.88□□□□□ -0.51
SPARC-207ENST00000537849 GOLGA6CA6NDK9 693 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 GOLGA6BA6NDN3 693 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 SDR42E2A6NKP2 422 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 C2CD4DB7Z1M9 353 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 AGPSO00116 658 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 EPOP01588 193 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 GOLGA6DP0CG33 693 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 TPH1P17752 444 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 POLR2EP19388 210 aaKnown RBP11.87□□□□□ -0.51
SPARC-207ENST00000537849 STK19P49842 368 aaPredicted RBP11.87□□□□□ -0.51
SPARC-207ENST00000537849 SCNN1BP51168 640 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 SESN2P58004 480 aaPredicted RBP11.87□□□□□ -0.51
SPARC-207ENST00000537849 GPX6P59796 221 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 DNAJC21Q5F1R6 531 aaKnown RBP11.87□□□□□ -0.51
SPARC-207ENST00000537849 CFAP58Q5T655 872 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 NAPEPLDQ6IQ20 393 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 LINC00523Q86TU6 105 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 ZBED8Q8IZ13 594 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 AHI1Q8N157 1196 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 CPA6Q8N4T0 437 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 SH2D3CQ8N5H7 860 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 DEFB123Q8N688 67 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 ATP11CQ8NB49 1132 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 FBXO36Q8NEA4 188 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 IPMKQ8NFU5 416 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 TTC8Q8TAM2 541 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 WFIKKN2Q8TEU8 576 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 PYROXD1Q8WU10 500 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 UBLCP1Q8WVY7 318 aaPredicted RBP11.87□□□□□ -0.51
SPARC-207ENST00000537849 PPM1EQ8WY54 764 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 LRRC39Q96DD0 335 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms