RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 KIRREL3Q8IZU9 778 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 C2CD4AQ8NCU7 369 aaPredicted RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 OR6Y1Q8NGX8 325 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 SCG3Q8WXD2 468 aaKnown RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 SLC7A6OSQ96CW6 309 aaPredicted RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 TSPAN17Q96FV3 270 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 BTBD10Q9BSF8 475 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 HIPK3Q9H422 1215 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMG6-203ENST00000536871 DNAJC28Q9NX36 388 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 SLC17A6Q9P2U8 582 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 STK39Q9UEW8 545 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 BAIAP2L1Q9UHR4 511 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 RIMKLBQ9ULI2 386 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 MYO16Q9Y6X6 1858 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 SLCO1B7G3V0H7 640 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 HGSO14964 777 aaPredicted RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 SLC7A4O43246 635 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 TRIM13O60858 407 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 LMNAP02545 664 aaKnown RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 STMN1P16949 149 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 OR1E1P30953 314 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 SLC12A2P55011 1212 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 AQP5P55064 265 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 CDH4P55283 916 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 IKBKEQ14164 716 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 POU6F1Q14863 301 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 KIAA1841Q6NSI8 718 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 TFAP2DQ7Z6R9 452 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 PTCD3Q96EY7 689 aaKnown RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 NACA2Q9H009 215 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 NT5MQ9NPB1 228 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 ZNF212Q9UDV6 495 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 CORO1CQ9ULV4 474 aaPredicted RBP13.74□□□□□ -0.21
SMG6-203ENST00000536871 SLC27A5Q9Y2P5 690 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 ACOT9Q9Y305 439 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 TRIM17Q9Y577 477 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 PCDHB12Q9Y5F1 795 aa13.74□□□□□ -0.21
SMG6-203ENST00000536871 CCDC195A0A1B0GUA6 201 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 KLHL33A6NCF5 533 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 ACSL4O60488 711 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 PRAMEF11O60813 436 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 VAPBO95292 243 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 FGF1P05230 155 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 EZRP15311 586 aaKnown RBP13.73□□□□□ -0.21
SMG6-203ENST00000536871 SERPINB5P36952 375 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 CLCN5P51795 746 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 RAB10P61026 200 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 ITKQ08881 620 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 LBRQ14739 615 aaKnown RBP13.73□□□□□ -0.21
SMG6-203ENST00000536871 ALFQ53S48 1182 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 PPM1JQ5JR12 505 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 HECTD3Q5T447 861 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 C1orf53Q5VUE5 145 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 ALG1LQ6GMV1 187 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 NEPROQ6NW34 567 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 C16orf46Q6P387 395 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 CNKSR3Q6P9H4 555 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 CMC1Q7Z7K0 106 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 ZNF354CQ86Y25 554 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 C10orf107Q8IVU9 208 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 GPR65Q8IYL9 337 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 RNF168Q8IYW5 571 aaPredicted RBP13.73□□□□□ -0.21
SMG6-203ENST00000536871 TTC9BQ8N6N2 239 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 PABPC5Q96DU9 382 aaKnown RBP13.73□□□□□ -0.21
SMG6-203ENST00000536871 FEM1CQ96JP0 617 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 MYRFLQ96LU7 910 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 TBC1D10AQ9BXI6 508 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 TRPC7Q9HCX4 862 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 BATF3Q9NR55 127 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 SLC39A10Q9ULF5 831 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 DNAJC16Q9Y2G8 782 aa13.73□□□□□ -0.21
SMG6-203ENST00000536871 LOC285095A0A1B0GVY8 99 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 PQBP1O60828 265 aaKnown RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 CLDN11O75508 207 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 VNN2O95498 520 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 LATS1O95835 1130 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 AHSGP02765 367 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 SLC26A3P40879 764 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 IRX4P78413 519 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 ZNF235Q14590 738 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 GRM3Q14832 879 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 VEPH1Q14D04 833 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 TSTD2Q5T7W7 516 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 METTL21CQ5VZV1 264 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 ZYG11AQ6WRX3 759 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 CHST9Q7L1S5 443 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 KIF2BQ8N4N8 673 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 IGSF8Q969P0 613 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 PSMG2Q969U7 264 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 CCDC126Q96EE4 140 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 TRMT2BQ96GJ1 504 aaKnown RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 RILPQ96NA2 401 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 UNC93B1Q9H1C4 597 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 MRGBPQ9NV56 204 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 IL1RAPL1Q9NZN1 696 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 TRPM5Q9NZQ8 1165 aa13.72□□□□□ -0.21
SMG6-203ENST00000536871 UXTQ9UBK9 157 aaPredicted RBP13.72□□□□□ -0.21
SMG6-203ENST00000536871 FBXO5Q9UKT4 447 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms