RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TSC1Q92574 1164 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 EXOC2Q96KP1 924 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 NCAPGQ9BPX3 1015 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 UVRAGQ9P2Y5 699 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 SNX11Q9Y5W9 270 aa13.38□□□□□ -0.27
PRKDC-206ENST00000536429 ASCC3Q8N3C0 2202 aaKnown RBP13.37□□□□□ -0.27
PRKDC-206ENST00000536429 ZSCAN5CA6NGD5 496 aaPredicted RBP13.37□□□□□ -0.27
PRKDC-206ENST00000536429 H3BRJ5 948 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 DFFAO00273 331 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 KRIT1O00522 736 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 KCNK3O14649 394 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 LATO43561 262 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 UGT2B4P06133 528 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 SYPP08247 313 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 ABL2P42684 1182 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 RGRP47804 291 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 AFF3P51826 1226 aaKnown RBP13.37□□□□□ -0.27
PRKDC-206ENST00000536429 INO80DQ53TQ3 878 aaPredicted RBP13.37□□□□□ -0.27
PRKDC-206ENST00000536429 ERMP1Q7Z2K6 904 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 PLPP6Q8IY26 295 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 SLC35G2Q8TBE7 412 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 KLK6Q92876 244 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 MRFAP1L1Q96HT8 127 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 HDAC8Q9BY41 377 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 UBA2Q9UBT2 640 aaPredicted RBP13.37□□□□□ -0.27
PRKDC-206ENST00000536429 TFR2Q9UP52 801 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 CA5BQ9Y2D0 317 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 ANKRD6Q9Y2G4 727 aa13.37□□□□□ -0.27
PRKDC-206ENST00000536429 FNDC3AQ9Y2H6 1198 aaKnown RBP13.37□□□□□ -0.27
PRKDC-206ENST00000536429 NYNRINQ9P2P1 1898 aaKnown RBP13.37□□□□□ -0.27
PRKDC-206ENST00000536429 A0A1W2PQU0 124 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 A0A1W2PR77 199 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 ARHGAP42A6NI28 874 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 MUSKO15146 869 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 SPINT1O43278 529 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 RNGTTO60942 597 aaKnown RBP13.36□□□□□ -0.27
PRKDC-206ENST00000536429 ADRB3P13945 408 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 CD59P13987 128 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 PRLRP16471 622 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 ITGB7P26010 798 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 ARL4AP40617 200 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 ZNF135P52742 658 aaPredicted RBP13.36□□□□□ -0.27
PRKDC-206ENST00000536429 CDH6P55285 790 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 RHOAP61586 193 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 SNRPD1P62314 119 aaKnown RBP13.36□□□□□ -0.27
PRKDC-206ENST00000536429 RACK1P63244 317 aaKnown RBP13.36□□□□□ -0.27
PRKDC-206ENST00000536429 MESDQ14696 234 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 LRRC73Q5JTD7 316 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 SEL1L3Q68CR1 1132 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 TRIM69Q86WT6 500 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 DEFB124Q8NES8 71 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 FAM71BQ8TC56 605 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 SERAC1Q96JX3 654 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 NSMCE3Q96MG7 304 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 KLHL32Q96NJ5 620 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 KDM4CQ9H3R0 1056 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 DYRK4Q9NR20 520 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 DNAAF2Q9NVR5 837 aaKnown RBP13.36□□□□□ -0.27
PRKDC-206ENST00000536429 GGT7Q9UJ14 662 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 ZFR2Q9UPR6 939 aaKnown RBP13.36□□□□□ -0.27
PRKDC-206ENST00000536429 ITM2BQ9Y287 266 aa13.36□□□□□ -0.27
PRKDC-206ENST00000536429 ADAMTS9Q9P2N4 1935 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 C16orf96A6NNT2 1141 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 OPHN1O60890 802 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 KCNK5O95279 499 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 PIGNO95427 931 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 POP4O95707 220 aaKnown RBP13.35□□□□□ -0.27
PRKDC-206ENST00000536429 ITIH2P19823 946 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 GRIA4P48058 902 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 NEK3P51956 506 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 DPYSL3Q14195 570 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 FGL2Q14314 439 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 KRT81Q14533 505 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 ZNF284Q2VY69 593 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 HLA-BQ31612 363 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 ZNF805Q5CZA5 627 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 PRAMEF14Q5SWL7 426 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 PSAPL1Q6NUJ1 521 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 PIP4P1Q86T03 277 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
PRKDC-206ENST00000536429 CASKIN2Q8WXE0 1202 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 PPP1R16AQ96I34 528 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 GDAP1L1Q96MZ0 367 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 CAMK1GQ96NX5 476 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 MYOCQ99972 504 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 ZDHHC5Q9C0B5 715 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 GAREM1Q9H706 876 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 SP110Q9HB58 689 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 PREBQ9HCU5 417 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 FZD3Q9NPG1 666 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 AASDHPPTQ9NRN7 309 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 DONSONQ9NYP3 566 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 IPO11Q9UI26 975 aaKnown RBP13.35□□□□□ -0.27
PRKDC-206ENST00000536429 HYOU1Q9Y4L1 999 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 FADS3Q9Y5Q0 445 aa13.35□□□□□ -0.27
PRKDC-206ENST00000536429 TTC24A2A3L6 582 aaPredicted RBP13.34□□□□□ -0.27
PRKDC-206ENST00000536429 SOWAHDA6NJG2 315 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 H0Y8X5 98 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 VILLO15195 856 aa13.34□□□□□ -0.27
PRKDC-206ENST00000536429 SLC31A1O15431 190 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms