RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PDFQ9HBH1 243 aa14.5□□□□□ -0.09
UBE3B-206ENST00000536398 TM7SF3Q9NS93 570 aa14.5□□□□□ -0.09
UBE3B-206ENST00000536398 ETNK2Q9NVF9 386 aa14.5□□□□□ -0.09
UBE3B-206ENST00000536398 IP6K2Q9UHH9 426 aa14.5□□□□□ -0.09
UBE3B-206ENST00000536398 ZFR2Q9UPR6 939 aaKnown RBP14.5□□□□□ -0.09
UBE3B-206ENST00000536398 ZSCAN5CA6NGD5 496 aaPredicted RBP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 SLC31A1O15431 190 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 MFAP3LO75121 409 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 PCDH8O95206 1070 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 POP4O95707 220 aaKnown RBP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 CER1O95813 267 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 TOP3BO95985 862 aaKnown RBP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 UGT2B4P06133 528 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 ADRB3P13945 408 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 ITIH2P19823 946 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 AMPD1P23109 780 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 CD38P28907 300 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 ABL2P42684 1182 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 NDST2P52849 883 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 C21orf59P57076 290 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 SNRPD1P62314 119 aaKnown RBP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 SLC25A11Q02978 314 aaKnown RBP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 SLC14A1Q13336 389 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 TRIM14Q14142 442 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 PIGHQ14442 188 aaPredicted RBP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 ACAP1Q15027 740 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 SLC18A3Q16572 532 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 ZNF284Q2VY69 593 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 BOLA3Q53S33 107 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 INO80DQ53TQ3 878 aaPredicted RBP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 SEL1L3Q68CR1 1132 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 POLNQ7Z5Q5 900 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 PSTKQ8IV42 348 aaKnown RBP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 ZNF564Q8TBZ8 553 aaPredicted RBP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 PREBQ9HCU5 417 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 FZD3Q9NPG1 666 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 ABHD10Q9NUJ1 306 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 SPTLC3Q9NUV7 552 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 LHX3Q9UBR4 397 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 UBA2Q9UBT2 640 aaPredicted RBP14.49□□□□□ -0.09
UBE3B-206ENST00000536398 GGT7Q9UJ14 662 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 BTBD3Q9Y2F9 522 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 FADS3Q9Y5Q0 445 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 DOCK9Q9BZ29 2069 aa14.49□□□□□ -0.09
UBE3B-206ENST00000536398 C16orf96A6NNT2 1141 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 EIF3CLB5ME19 914 aaKnown RBP14.48□□□□□ -0.09
UBE3B-206ENST00000536398 MYO1FO00160 1098 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 TLR4O00206 839 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 DFFAO00273 331 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 SPINT1O43278 529 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 PRAMEF11O60813 436 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 CD48P09326 243 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 PMLP29590 882 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 RGRP47804 291 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 HCAR3P49019 387 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 NEK3P51956 506 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 RHOAP61586 193 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 TBX2Q13207 712 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-206ENST00000536398 FGL2Q14314 439 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 SHBQ15464 509 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 DPYSL2Q16555 572 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 ZNF423Q2M1K9 1284 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 ATP13A4Q4VNC1 1196 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 ZNF805Q5CZA5 627 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 LRRC73Q5JTD7 316 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 NAPEPLDQ6IQ20 393 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 FBXL19Q6PCT2 694 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 HORMAD1Q86X24 394 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 SPATS2Q86XZ4 545 aaKnown RBP14.48□□□□□ -0.09
UBE3B-206ENST00000536398 NAXDQ8IW45 347 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 NIPA2Q8N8Q9 360 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 SETD7Q8WTS6 366 aaKnown RBP14.48□□□□□ -0.09
UBE3B-206ENST00000536398 PPP1R16AQ96I34 528 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 KLHL32Q96NJ5 620 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 EIF3CQ99613 913 aaKnown RBP14.48□□□□□ -0.09
UBE3B-206ENST00000536398 RBSNQ9H1K0 784 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 DEF6Q9H4E7 631 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 SLC32A1Q9H598 525 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 CAAP1Q9H8G2 361 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 NHEJ1Q9H9Q4 299 aaPredicted RBP14.48□□□□□ -0.09
UBE3B-206ENST00000536398 PCDH18Q9HCL0 1135 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 ITM2BQ9Y287 266 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 PCNX2A6NKB5 2137 aa14.48□□□□□ -0.09
UBE3B-206ENST00000536398 SSU72P8A0A1W2PR75 194 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 ARHGAP42A6NI28 874 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 H3BRJ5 948 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 AKR1B10O60218 316 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 BUB1BO60566 1050 aaPredicted RBP14.47□□□□□ -0.09
UBE3B-206ENST00000536398 CBFA2T3O75081 653 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 PIGNO95427 931 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 H2AFZP0C0S5 128 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 ZNF883P0CG24 379 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 SPINK2P20155 84 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 SSR1P43307 286 aaKnown RBP14.47□□□□□ -0.09
UBE3B-206ENST00000536398 CLDN2P57739 230 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 TAS2R40P59535 323 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 SIM1P81133 766 aaPredicted RBP14.47□□□□□ -0.09
UBE3B-206ENST00000536398 FOXC1Q12948 553 aa14.47□□□□□ -0.09
UBE3B-206ENST00000536398 MMRN1Q13201 1228 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms