RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 KPNA3O00505 521 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 KRIT1O00522 736 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 APOL1O14791 398 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DDX3YO15523 660 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 KRT86O43790 486 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 NDUFS2O75306 463 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZRANB2O95218 330 aaKnown RBP eCLIP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 POP4O95707 220 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SEMA4FO95754 770 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 IGSF6O95976 241 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PRNPP04156 253 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RETP07949 1114 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PECAM1P16284 738 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ITPKAP23677 461 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ADPRHP54922 357 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TAS2R38P59533 333 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DYNLT1P63172 113 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ZNF33AQ06730 810 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RFTN1Q14699 578 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LBRQ14739 615 aaKnown RBP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MYLK3Q32MK0 819 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TFDP3Q5H9I0 405 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SPDYCQ5MJ68 293 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PLA2G2CQ5R387 149 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FAM182AQ5T1J6 154 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TMCO4Q5TGY1 634 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 DCAF12L1Q5VU92 463 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FAM46CQ5VWP2 391 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 AADACL2Q6P093 401 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PEX26Q7Z412 305 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RCOR2Q8IZ40 523 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RYBPQ8N488 228 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 EXD1Q8NHP7 514 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GANCQ8TET4 914 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RUBCNQ92622 972 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HDAC11Q96DB2 347 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GDAP1L1Q96MZ0 367 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 OLFM3Q96PB7 478 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SMOC1Q9H4F8 434 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SGK2Q9HBY8 427 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LZTFL1Q9NQ48 299 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TMEM74BQ9NUR3 256 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 NCDNQ9UBB6 729 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SAE1Q9UBE0 346 aaPredicted RBP11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GMEB2Q9UKD1 530 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 AMFRQ9UKV5 643 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PPP2R2CQ9Y2T4 447 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HEY1Q9Y5J3 304 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SLCO1B1Q9Y6L6 691 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PI4KAP42356 2102 aa11.48□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PCDH15Q96QU1 1955 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TTC24A2A3L6 582 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 METTL12A8MUP2 240 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PLRG1O43660 514 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CST8O60676 142 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PIGNO95427 931 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 UGT2B4P06133 528 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PYGMP11217 842 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CR2P20023 1033 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ITGB7P26010 798 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MAOBP27338 520 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MPLP40238 635 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PPP2CBP62714 309 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PPP2CAP67775 309 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CREB5Q02930 508 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PPIDQ08752 370 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SPEM2Q0P670 501 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PPP2R5EQ16537 467 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 IFI16Q16666 785 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LYSMD4Q5XG99 296 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 NCEH1Q6PIU2 408 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 B4GALNT4Q76KP1 1039 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PARS2Q7L3T8 475 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LRRC49Q8IUZ0 686 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CCDC50Q8IVM0 306 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SYCE1Q8N0S2 351 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TEX26Q8N6G2 289 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CADM4Q8NFZ8 388 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 OR14C36Q8NHC7 312 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MAML1Q92585 1016 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 HES6Q96HZ4 224 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 RBM41Q96IZ5 413 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 TSGA13Q96PP4 275 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PSKH2Q96QS6 385 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 LGMNQ99538 433 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MGME1Q9BQP7 344 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ORAI3Q9BRQ5 295 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CINPQ9BW66 212 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 CPEB1Q9BZB8 566 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 NCKAP1Q9Y2A7 1128 aa11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.47□□□□□ -0.57
TNFRSF1A-208ENST00000536194 GON4LQ3T8J9 2241 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 FAM47DPA6NHR8 397 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 PATE3B3GLJ2 98 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 MATN3O15232 486 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 SPINT1O43278 529 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 IGHV4-34P06331 123 aa11.46□□□□□ -0.57
TNFRSF1A-208ENST00000536194 ADRB3P13945 408 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms