RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 LPPQ93052 612 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 SPATA5L1Q9BVQ7 753 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 BLOC1S4Q9NUP1 217 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 EFCAB10A6NFE3 127 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 KLHL18O94889 574 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 PSMD5Q16401 504 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 ZC3H7AQ8IWR0 971 aaKnown RBP18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 ANAPC2Q9UJX6 822 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 SLC27A5Q9Y2P5 690 aa18.35■□□□□ 0.53
SFSWAP-203ENST00000535236 NDUFV1P49821 464 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 SLC34A1Q06495 639 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 DEFB115Q30KQ5 88 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 ZCCHC7Q8N3Z6 543 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 FBXO30Q8TB52 745 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 ENKURQ8TC29 256 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.34■□□□□ 0.531e-9■■■■■ 54.1
SFSWAP-203ENST00000535236 RACGAP1Q9H0H5 632 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 GCATO75600 419 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 PPM1AP35813 382 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 EIF3MQ7L2H7 374 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 GPR142Q7Z601 462 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 ARMCX1Q9P291 453 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 E9PCH4 1651 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 C1orf232A0A0U1RR37 186 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 ISM1B1AKI9 464 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 H7C0S8 307 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 MAFO75444 373 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 RPL9P32969 192 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 PMF1Q6P1K2 205 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 C1orf186Q6ZWK4 172 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 GSAPA4D1B5 854 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 IRF6O14896 467 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 RPL3P39023 403 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 C21orf59P57076 290 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 DLG4P78352 724 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 TRAF3Q13114 568 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 ZSWIM7Q19AV6 140 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 PIGZQ86VD9 579 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 ARMC8Q8IUR7 673 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 FAM163AQ96GL9 167 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 DDX20Q9UHI6 824 aaKnown RBP18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 ZMYND8Q9ULU4 1186 aaPredicted RBP18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 ANGPT4Q9Y264 503 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 MYRFQ9Y2G1 1151 aa18.34■□□□□ 0.53
SFSWAP-203ENST00000535236 MLYCDO95822 493 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 SP100P23497 879 aaPredicted RBP18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 MAMLD1Q13495 774 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 PACS1Q6VY07 963 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 PEG10Q86TG7 708 aaKnown RBP18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 LRRC49Q8IUZ0 686 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 SEMA3CQ99985 751 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 HTATIP2Q9BUP3 242 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 SLC25A12O75746 678 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 CDC42P60953 191 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 PEX6Q13608 980 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 FERD3LQ96RJ6 166 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 BTBD7Q9P203 1132 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 DAPK2Q9UIK4 370 aa18.33■□□□□ 0.53
SFSWAP-203ENST00000535236 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 ATP6V1G2O95670 118 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 ZSCAN5DPP0CG00 497 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 ATP4AP20648 1035 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 CD52P31358 61 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 NDUFAF6Q330K2 333 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 DCLRE1AQ6PJP8 1040 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 LRRC74BQ6ZQY2 392 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 SMYD1Q8NB12 490 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 MMADHCQ9H3L0 296 aaPredicted RBP18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 TLL1O43897 1013 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 MGRN1O60291 552 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 ECDO95905 644 aaPredicted RBP18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 ADRA1DP25100 572 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 HNF4AP41235 474 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 NAA20P61599 178 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 IFI35P80217 286 aaPredicted RBP18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 DGUOKQ16854 277 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 HYIQ5T013 277 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 KIAA0408Q6ZU52 694 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 SNRNP25Q9BV90 132 aaKnown RBP18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 SEMA6AQ9H2E6 1030 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 NCOA3Q9Y6Q9 1424 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 ZSCAN5CA6NGD5 496 aaPredicted RBP18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 SLC35G4P0C7Q5 338 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 PPP3CAQ08209 521 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 XKR6Q5GH73 641 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 FOXR1Q6PIV2 292 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 UNC5AQ6ZN44 842 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 CEP68Q76N32 757 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 ANKRD52Q8NB46 1076 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 ADAM28Q9UKQ2 775 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 COG5Q9UP83 839 aa18.33■□□□□ 0.52
SFSWAP-203ENST00000535236 NWD1Q149M9 1564 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 LMTK2Q8IWU2 1503 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 PNMA8CA0A1B0GUJ8 204 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 FFAR3O14843 346 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 SNPHO15079 494 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 GPR42O15529 346 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 MAPKAPK2P49137 400 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 SMAD3P84022 425 aaKnown RBP18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 ZNF844Q08AG5 666 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms