RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-233	ENST00000534636	TSPAN6	O43657	245 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	LRIG2	O94898	1065 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	GSR	P00390	522 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	PLEK	P08567	350 aa	Predicted RBP	18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	HOXB3	P14651	431 aa	Predicted RBP	18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	CHRNB2	P17787	502 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	GPD1	P21695	349 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	ABCG1	P45844	678 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	RABIF	P47224	123 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	GSC	P56915	257 aa	Predicted RBP	18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	SEMG2	Q02383	582 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	ZNF805	Q5CZA5	627 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	EFHC2	Q5JST6	749 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	ARTN	Q5T4W7	220 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	SASS6	Q6UVJ0	657 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	NLRP14	Q86W24	1093 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	SLC22A18AS	Q8N1D0	253 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	SLC25A45	Q8N413	288 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	OR2AP1	Q8NGE2	309 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	JOSD2	Q8TAC2	188 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	ARHGEF2	Q92974	986 aa	Known RBP	18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	NTAN1	Q96AB6	310 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	DUSP23	Q9BVJ7	150 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	OSBPL1A	Q9BXW6	950 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	LMBRD1	Q9NUN5	540 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	FANCL	Q9NW38	375 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	UCKL1	Q9NWZ5	548 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	NLGN3	Q9NZ94	848 aa		18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	IPO11	Q9UI26	975 aa	Known RBP	18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	SMG1	Q96Q15	3661 aa	Known RBP	18.78	■□□□□ 0.6
CTSB-233	ENST00000534636	KRIT1	O00522	736 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	FPGT	O14772	594 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	EPHB6	O15197	1021 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	GJB6	O95452	261 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	UNG	P13051	313 aa	Predicted RBP	18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	COPB1	P53618	953 aa	Known RBP	18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	HDAC4	P56524	1084 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	COL9A2	Q14055	689 aa	Predicted RBP	18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	CLEC16A	Q2KHT3	1053 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	RAB6C	Q53S08	254 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	DNAJC24	Q6P3W2	148 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	LRRC69	Q6ZNQ3	347 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	TMC6	Q7Z403	805 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	SLFN11	Q7Z7L1	901 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	PARG	Q86W56	976 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	CCDC185	Q8N715	623 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	C3orf20	Q8ND61	904 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	OR6K2	Q8NGY2	324 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	RFFL	Q8WZ73	363 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	BAP1	Q92560	729 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	CENPI	Q92674	756 aa	Predicted RBP	18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	GBP4	Q96PP9	640 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	RAB6C	Q9H0N0	254 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	NDFIP2	Q9NV92	336 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	ANO10	Q9NW15	660 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	SIK3	Q9Y2K2	1263 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	ACTL7A	Q9Y615	435 aa		18.77	■□□□□ 0.6
CTSB-233	ENST00000534636	ASXL3	Q9C0F0	2248 aa		18.77	■□□□□ 0.59
CTSB-233	ENST00000534636	C16orf96	A6NNT2	1141 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	LGALS16	A8MUM7	142 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	FAM72C	H0Y354	149 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	RRP8	O43159	456 aa	Known RBP	18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	BUB1	O43683	1085 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	POP4	O95707	220 aa	Known RBP	18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	PAK4	O96013	591 aa	Predicted RBP	18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	UGT2B4	P06133	528 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	CKMT1A	P12532	417 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	CDK11B	P21127	795 aa	Known RBP	18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	DUSP3	P51452	185 aa	Predicted RBP	18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	INSM1	Q01101	510 aa	Predicted RBP	18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	MYL5	Q02045	173 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	UBXN1	Q04323	297 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	RAD51	Q06609	339 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	STX1A	Q16623	288 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	FAM72A	Q5TYM5	149 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	FAM72D	Q6L9T8	149 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	CLEC17A	Q6ZS10	378 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	FAM72B	Q86X60	149 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	PHF13	Q86YI8	300 aa	Predicted RBP	18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	CACTIN-AS1	Q8N1I8	211 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	DENND6B	Q8NEG7	585 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	GDAP1L1	Q96MZ0	367 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	EPAS1	Q99814	870 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	USP29	Q9HBJ7	922 aa		18.76	■□□□□ 0.59
CTSB-233	ENST00000534636	POM121B	A6NF01	834 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	EIF4E1B	A6NMX2	242 aa	Known RBP	18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	GOLGA6L22	H0YM25	854 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	IGSF6	O95976	241 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	CCDC172	P0C7W6	258 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	EPHB2	P29323	1055 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	GK	P32189	559 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	RFC1	P35251	1148 aa	Predicted RBP	18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	PDE1C	Q14123	709 aa	Predicted RBP	18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	RTP5	Q14D33	572 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	ZNF542P	Q5EBM4	170 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	SCYL2	Q6P3W7	929 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	RBM43	Q6ZSC3	357 aa	Known RBP	18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	DCBLD1	Q8N8Z6	715 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	CASKIN2	Q8WXE0	1202 aa		18.75	■□□□□ 0.59
CTSB-233	ENST00000534636	BMF	Q96LC9	184 aa		18.75	■□□□□ 0.59

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