RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 INPP4AQ96PE3 977 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-236ENST00000533667 CEP41Q9BYV8 373 aa7.09□□□□□ -1.27
CTNND1-236ENST00000533667 TRIM8Q9BZR9 551 aa7.09□□□□□ -1.27
CTNND1-236ENST00000533667 CIPCQ9C0C6 399 aa7.09□□□□□ -1.27
CTNND1-236ENST00000533667 C6orf62Q9GZU0 229 aaPredicted RBP7.09□□□□□ -1.27
CTNND1-236ENST00000533667 THG1LQ9NWX6 298 aaKnown RBP7.09□□□□□ -1.27
CTNND1-236ENST00000533667 OR12D3Q9UGF7 316 aa7.09□□□□□ -1.27
CTNND1-236ENST00000533667 MANSC4A6NHS7 340 aaPredicted RBP7.09□□□□□ -1.28
CTNND1-236ENST00000533667 SLC28A1O00337 649 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 NBNO60934 754 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 MAFO75444 373 aaPredicted RBP7.09□□□□□ -1.28
CTNND1-236ENST00000533667 TSPAN19P0C672 248 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 PSMB4P28070 264 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 ADSSP30520 456 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 NOMO3P69849 1222 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 MRPS22P82650 360 aaKnown RBP7.09□□□□□ -1.28
CTNND1-236ENST00000533667 TRIM25Q14258 630 aaKnown RBP7.09□□□□□ -1.28
CTNND1-236ENST00000533667 ZACNQ401N2 412 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 PAN2Q504Q3 1202 aaKnown RBP7.09□□□□□ -1.28
CTNND1-236ENST00000533667 MZT2AQ6P582 158 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 PLPPR4Q7Z2D5 763 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 DEPDC4Q8N2C3 294 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 AMER2Q8N7J2 671 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 SCAIQ8N9R8 606 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 ANKRD52Q8NB46 1076 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 MED8Q96G25 268 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 SENP8Q96LD8 212 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 SPATA5L1Q9BVQ7 753 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 OSBPL11Q9BXB4 747 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 C1QTNF7Q9BXJ2 289 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 FAM124BQ9H5Z6 455 aaPredicted RBP7.09□□□□□ -1.28
CTNND1-236ENST00000533667 RSL24D1Q9UHA3 163 aaKnown RBP7.09□□□□□ -1.28
CTNND1-236ENST00000533667 PCDHGA3Q9Y5H0 932 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 SNX8Q9Y5X2 465 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 PTCH2Q9Y6C5 1203 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 MYPNQ86TC9 1320 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 NRCAMQ92823 1304 aa7.09□□□□□ -1.28
CTNND1-236ENST00000533667 MATN2O00339 956 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 FESP07332 822 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 ABCB1P08183 1280 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-236ENST00000533667 GLRA2P23416 452 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 AKAP5P24588 427 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 FMO4P31512 558 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 EPHX2P34913 555 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 POLD2P49005 469 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 RAB10P61026 200 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 RUNDC3AQ59EK9 446 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 LIPMQ5VYY2 423 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 RASGEF1CQ8N431 466 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 SFRP1Q8N474 314 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 AGAP11Q8TF27 550 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 BSNDQ8WZ55 320 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 USP7Q93009 1102 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 MBOAT7Q96N66 472 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 BBS4Q96RK4 519 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 YME1L1Q96TA2 773 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 SNRNP25Q9BV90 132 aaKnown RBP7.08□□□□□ -1.28
CTNND1-236ENST00000533667 C2orf49Q9BVC5 232 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-236ENST00000533667 DDX4Q9NQI0 724 aaKnown RBP7.08□□□□□ -1.28
CTNND1-236ENST00000533667 TAS2R14Q9NYV8 317 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 PXDNQ92626 1479 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 KIDINS220Q9ULH0 1771 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 BBIP1A8MTZ0 92 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 H3BN98 237 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 CABYRO75952 493 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 ENDOD1O94919 500 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 TGDSO95455 350 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 SHBGP04278 402 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 LGALS2P05162 132 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 ADRB2P07550 413 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 COX7A2P14406 83 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 GTF2E2P29084 291 aaKnown RBP7.08□□□□□ -1.28
CTNND1-236ENST00000533667 NOS3P29474 1203 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 STAT5AP42229 794 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 PTDSS1P48651 473 aaKnown RBP7.08□□□□□ -1.28
CTNND1-236ENST00000533667 ALDH9A1P49189 494 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 CCNHP51946 323 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-236ENST00000533667 NAGLUP54802 743 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 BST1Q10588 318 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 STX4Q12846 297 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 PLCL1Q15111 1095 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 DGKKQ5KSL6 1271 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 CELF3Q5SZQ8 465 aaKnown RBP7.08□□□□□ -1.28
CTNND1-236ENST00000533667 ZNF549Q6P9A3 640 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 MARK2Q7KZI7 788 aaKnown RBP7.08□□□□□ -1.28
CTNND1-236ENST00000533667 SH3BP5LQ7L8J4 393 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 TSPAN14Q8NG11 270 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 OR52K1Q8NGK4 314 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 MYDGFQ969H8 173 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 TPD52L3Q96J77 140 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 ZBTB45Q96K62 511 aaPredicted RBP7.08□□□□□ -1.28
CTNND1-236ENST00000533667 PIF1Q9H611 641 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 CCNB1IP1Q9NPC3 277 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 PNPLA3Q9NST1 481 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 ARL15Q9NXU5 204 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 ENTPD4Q9Y227 616 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 CRYL1Q9Y2S2 319 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 FAM237BA0A1B0GVD1 139 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 PIPSLA2A3N6 862 aa7.08□□□□□ -1.28
CTNND1-236ENST00000533667 RECQL4O94761 1208 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms