RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 COG4Q9H9E3 785 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.56□□□□□ -0.4
RAD50-209ENST00000533482 PCDHB8Q9UN66 801 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 PKD1L3Q7Z443 1732 aa12.56□□□□□ -0.4
RAD50-209ENST00000533482 CKBP12277 381 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 MZF1P28698 734 aaPredicted RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 KHDC1Q4VXA5 237 aaKnown RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 ZNF697Q5TEC3 545 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 TAC4Q86UU9 113 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 BHLHE22Q8NFJ8 381 aaPredicted RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 ABCG8Q9H221 673 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 TAS2R13Q9NYV9 303 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 ZMYM5Q9UJ78 669 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 PEX11AO75192 247 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 LGR5O75473 907 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 RASSF9O75901 435 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 PARNO95453 639 aaKnown RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 DYNC1I2Q13409 638 aaKnown RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 TBCELQ5QJ74 424 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 ANKS6Q68DC2 871 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 SCARA3Q6AZY7 606 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 ACMSDQ8TDX5 336 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 TRPC4APQ8TEL6 797 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 SLCO2A1Q92959 643 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 ZMAT2Q96NC0 199 aaKnown RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 SEPT3Q9UH03 358 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 DERAQ9Y315 318 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 AKAP11Q9UKA4 1901 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 CITO14578 2027 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 PSMD12O00232 456 aaPredicted RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 KPNA3O00505 521 aaPredicted RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 SERPINA6P08185 405 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 HSPA1AP0DMV8 641 aaKnown RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 HSPA1BP0DMV9 641 aaKnown RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 CTPS1P17812 591 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 RANBP1P43487 201 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 ATP6AP1LQ52LC2 224 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 GDF6Q6KF10 455 aaPredicted RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 LRRC8BQ6P9F7 803 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 MON1AQ86VX9 555 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 IFNL1Q8IU54 200 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 PTGR2Q8N8N7 351 aaPredicted RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 FNDC5Q8NAU1 212 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 METTL6Q8TCB7 284 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 PPP2R3CQ969Q6 453 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 EBF4Q9BQW3 602 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 MYH3P11055 1940 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 CCNT2O60583 730 aaKnown RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 SKIV2L2P42285 1042 aaKnown RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 TDRPQ86YL5 185 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 HPS6Q86YV9 775 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 SLC22A9Q8IVM8 553 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 HAPLN2Q9GZV7 340 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 PAPOLBQ9NRJ5 636 aaKnown RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 SLC13A4Q9UKG4 626 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 ZNF711Q9Y462 761 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 MFHAS1Q9Y4C4 1052 aa12.55□□□□□ -0.4
RAD50-209ENST00000533482 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.55□□□□□ -0.4
RAD50-209ENST00000533482 LTBP3Q9NS15 1303 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 TK2O00142 265 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 ALBP02768 609 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 ANPEPP15144 967 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 RAB10P61026 200 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 MPP1Q00013 466 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 SLC25A11Q02978 314 aaKnown RBP12.54□□□□□ -0.4
RAD50-209ENST00000533482 WASHC5Q12768 1159 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 ZNF460Q14592 562 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 RAB6CQ53S08 254 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 RINLQ6ZS11 566 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
RAD50-209ENST00000533482 ZNF558Q96NG5 402 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 PRPF18Q99633 342 aaKnown RBP12.54□□□□□ -0.4
RAD50-209ENST00000533482 TMEM79Q9BSE2 394 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 RAB6CQ9H0N0 254 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 IGFLR1Q9H665 355 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 TAS2R1Q9NYW7 299 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 COPG2Q9UBF2 871 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 ZNF212Q9UDV6 495 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 BTRCQ9Y297 605 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 PCDHB9Q9Y5E1 797 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 SYNCRIPO60506 623 aaKnown RBP12.54□□□□□ -0.4
RAD50-209ENST00000533482 PGM3O95394 542 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 L1CAMP32004 1257 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 CRHR1P34998 444 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 PTPN9P43378 593 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 KPNA1P52294 538 aaPredicted RBP12.54□□□□□ -0.4
RAD50-209ENST00000533482 GRM3Q14832 879 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 TTLL9Q3SXZ7 439 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 INTS6LQ5JSJ4 861 aaKnown RBP12.54□□□□□ -0.4
RAD50-209ENST00000533482 LINGO4Q6UY18 593 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 IGDCC3Q8IVU1 814 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 HERC6Q8IVU3 1022 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 QKIQ96PU8 341 aaKnown RBP eCLIP12.54□□□□□ -0.4
RAD50-209ENST00000533482 PPP1R10Q96QC0 940 aaKnown RBP12.54□□□□□ -0.4
RAD50-209ENST00000533482 PEBP4Q96S96 227 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 HNRNPABQ99729 332 aaKnown RBP12.54□□□□□ -0.4
RAD50-209ENST00000533482 SH3GL3Q99963 347 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 NMRK1Q9NWW6 199 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 VTI1BQ9UEU0 232 aa12.54□□□□□ -0.4
RAD50-209ENST00000533482 DNMT3LQ9UJW3 386 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms