RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 B4GALNT4Q76KP1 1039 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 HOOK3Q86VS8 718 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 UNC93AQ86WB7 457 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 CYP4X1Q8N118 509 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 LSM14AQ8ND56 463 aaKnown RBP8.43□□□□□ -1.06
NEDD8-207ENST00000533242 SLC2A14Q8TDB8 520 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 IGSF8Q969P0 613 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 CRELD1Q96HD1 420 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 PIWIL1Q96J94 861 aaKnown RBP8.43□□□□□ -1.06
NEDD8-207ENST00000533242 SEC16BQ96JE7 1060 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 OSBPL8Q9BZF1 889 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 FAM129AQ9BZQ8 928 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.43□□□□□ -1.06
NEDD8-207ENST00000533242 PLK2Q9NYY3 685 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 SNX11Q9Y5W9 270 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 MYLKQ15746 1914 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 A0A1W2PQH9 124 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 HHLA1C9JL84 531 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 RASGRF2O14827 1237 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 MDM4O15151 490 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 TIMM44O43615 452 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 FAM200BP0CF97 657 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 MYBL1P10243 752 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 P4HA1P13674 534 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 HLA-EP13747 358 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 PRKCHP24723 683 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 SLC1A1P43005 524 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 SSR1P43307 286 aaKnown RBP8.43□□□□□ -1.06
NEDD8-207ENST00000533242 PSEN1P49768 467 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 CALCOCO2Q13137 446 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 MPP2Q14168 576 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 LRRC14Q15048 493 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 C10orf120Q5SQS8 335 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 KAZNQ674X7 775 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 MFSD7Q6UXD7 560 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 GPRIN1Q7Z2K8 1008 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 TMPRSS12Q86WS5 348 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 OR2T3Q8NH03 318 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 BHMTQ93088 406 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 NXPE2Q96DL1 559 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 P2RY11Q96G91 374 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 MCEEQ96PE7 176 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 CDK5RAP1Q96SZ6 601 aaKnown RBP8.43□□□□□ -1.06
NEDD8-207ENST00000533242 PRMT1Q99873 361 aaKnown RBP8.43□□□□□ -1.06
NEDD8-207ENST00000533242 SLC2A11Q9BYW1 496 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 TSPYL1Q9H0U9 437 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 LHX5Q9H2C1 402 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 NMUR1Q9HB89 426 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 MLXIPLQ9NP71 852 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 PNPLA8Q9NP80 782 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 CISHQ9NSE2 258 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 ELOVL2Q9NXB9 296 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 WHRNQ9P202 907 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 CYTH4Q9UIA0 394 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 ANKRD6Q9Y2G4 727 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 CAPN7Q9Y6W3 813 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 ACACAQ13085 2346 aa8.43□□□□□ -1.06
NEDD8-207ENST00000533242 URB1O60287 2271 aaKnown RBP8.42□□□□□ -1.06
NEDD8-207ENST00000533242 FAM149AA5PLN7 773 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 TMEM191CA6NGB0 347 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 DFNA5O60443 496 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 NDST1P52848 882 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 BPIFB4P59827 614 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 SLMAPQ14BN4 828 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 TTC31Q49AM3 519 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-207ENST00000533242 RNF187Q5TA31 235 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-207ENST00000533242 RHOT1Q8IXI2 618 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 KATNAL2Q8IYT4 538 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 LRRC34Q8IZ02 419 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 OTUD6BQ8N6M0 293 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 SLC39A7Q92504 469 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 SNX19Q92543 992 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 HAUS1Q96CS2 278 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 SNF8Q96H20 258 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 C9orf72Q96LT7 481 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 DCBLD2Q96PD2 775 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 HNRNPABQ99729 332 aaKnown RBP8.42□□□□□ -1.06
NEDD8-207ENST00000533242 TMEM109Q9BVC6 243 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 PRORYQ9H606 182 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 C6orf106Q9H6K1 298 aaPredicted RBP8.42□□□□□ -1.06
NEDD8-207ENST00000533242 C10orf88Q9H8K7 445 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 TM9SF3Q9HD45 589 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 NINJ2Q9NZG7 142 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 FTSJ1Q9UET6 329 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 DNPEPQ9ULA0 475 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 APC2O95996 2303 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 VGLL3A8MV65 326 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 PSTPIP1O43586 416 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 C1QL1O75973 258 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 TTC4O95801 387 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 AGTP01019 485 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 KLKB1P03952 638 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 CYBBP04839 570 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 CDK4P11802 303 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 ADORA2BP29275 332 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 ADCY8P40145 1251 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 ASPAP45381 313 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 COG7P83436 770 aa8.42□□□□□ -1.06
NEDD8-207ENST00000533242 C1QBPQ07021 282 aaKnown RBP8.42□□□□□ -1.06
NEDD8-207ENST00000533242 CAMK2GQ13555 558 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms