RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 SULT1E1P49888 294 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 ZNF135P52742 658 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 SLURP1P55000 103 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PSMD4P55036 377 aaKnown RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 CSNK2BP67870 215 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CCNA1P78396 465 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 OTUD4Q01804 1114 aaKnown RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 GUCY2DQ02846 1103 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 ROM1Q03395 351 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 FOXO1Q12778 655 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CSTF3Q12996 717 aaKnown RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 PDCLQ13371 301 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 MTMR1Q13613 665 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 ACVR2BQ13705 512 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 MXD4Q14582 209 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 KCNJ8Q15842 424 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 KRT24Q2M2I5 525 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 WDR72Q3MJ13 1102 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 AARDQ4LEZ3 155 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PITRM1Q5JRX3 1037 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 HECTD3Q5T447 861 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 RNF219Q5W0B1 726 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 DCLRE1AQ6PJP8 1040 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PEX26Q7Z412 305 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 SLC9B2Q86UD5 537 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CXorf67Q86X51 503 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 ZNF761Q86XN6 746 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 NME9Q86XW9 330 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PALB2Q86YC2 1186 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 GATAD2AQ86YP4 633 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PHYKPLQ8IUZ5 450 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 WDR49Q8IV35 697 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 UNC45BQ8IWX7 931 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 ZZZ3Q8IYH5 903 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 RCOR2Q8IZ40 523 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 ELMOD2Q8IZ81 293 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 BCL6BQ8N143 479 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 ZGPATQ8N5A5 531 aaKnown RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 CNTD1Q8N815 330 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 TMIEQ8NEW7 156 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 LPCAT1Q8NF37 534 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PHOSPHO2Q8TCD6 241 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 ADAMTS17Q8TE56 1095 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 GIPC3Q8TF64 312 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CCDC12Q8WUD4 166 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 SMG7Q92540 1137 aaKnown RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 MRPS27Q92552 414 aaKnown RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 PTPRUQ92729 1446 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 RAB7BQ96AH8 199 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 GRAMD1AQ96CP6 724 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 KLHL29Q96CT2 875 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CHMP6Q96FZ7 201 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 USP47Q96K76 1375 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 TMEM68Q96MH6 324 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 TOX2Q96NM4 488 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 ZNF184Q99676 751 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 NAPGQ99747 312 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 PRXQ9BXM0 1461 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 STK33Q9BYT3 514 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 OR2B2Q9GZK3 357 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CCDC8Q9H0W5 538 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 LRMDAQ9H2I8 198 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 TMEM60Q9H2L4 133 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 TMEM245Q9H330 911 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 NTN4Q9HB63 628 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 TRPV4Q9HBA0 871 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 SMYD2Q9NRG4 433 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 DDX18Q9NVP1 670 aaKnown RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 C14orf119Q9NWQ9 140 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 SENP1Q9P0U3 644 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 RNF14Q9UBS8 474 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CHORDC1Q9UHD1 332 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 SH3BGRL2Q9UJC5 107 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 GMEB2Q9UKD1 530 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 CDC42EP3Q9UKI2 254 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 BAG5Q9UL15 447 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 PTPN22Q9Y2R2 807 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 IPPQ9Y573 584 aa5.61□□□□□ -1.51
CD44-236ENST00000533222 MAGED1Q9Y5V3 778 aaPredicted RBP5.61□□□□□ -1.51
CD44-236ENST00000533222 PCF11O94913 1555 aaKnown RBP5.6□□□□□ -1.51
CD44-236ENST00000533222 ADGRL2O95490 1459 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 ARHGAP35Q9NRY4 1499 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 TRAPPC8Q9Y2L5 1435 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 UMODL1Q5DID0 1318 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 STK36Q9NRP7 1315 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 TYW5A2RUC4 315 aaKnown RBP5.6□□□□□ -1.51
CD44-236ENST00000533222 VPS37CA5D8V6 355 aaPredicted RBP5.6□□□□□ -1.51
CD44-236ENST00000533222 A8MXQ7 604 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 H0YIV9 168 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 KPNA4O00629 521 aaPredicted RBP5.6□□□□□ -1.51
CD44-236ENST00000533222 CASC3O15234 703 aaKnown RBP5.6□□□□□ -1.51
CD44-236ENST00000533222 SLC22A2O15244 555 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 AKAP10O43572 662 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 TSPAN6O43657 245 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 PIP5K1CO60331 668 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 PEX11AO75192 247 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 CDH16O75309 829 aa5.6□□□□□ -1.51
CD44-236ENST00000533222 TRMUO75648 421 aaKnown RBP5.6□□□□□ -1.51
CD44-236ENST00000533222 ASNSP08243 561 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms