RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CCDC122Q5T0U0 273 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 SPECC1LQ69YQ0 1117 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 FBXL19Q6PCT2 694 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 HORMAD1Q86X24 394 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 MFSD2AQ8NA29 543 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 CABIN1Q9Y6J0 2220 aa30.78■■■□□ 2.52
SSSCA1-207ENST00000533115 PRAMEF26H0Y7S4 382 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 TLR4O00206 839 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 KRIT1O00522 736 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 PCDH8O95206 1070 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 CYP1A2P05177 515 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 ZNF135P52742 658 aaPredicted RBP30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 TRIM14Q14142 442 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 PIGHQ14442 188 aaPredicted RBP30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 ATXN7L2Q5T6C5 722 aaPredicted RBP30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 PARS2Q7L3T8 475 aaKnown RBP30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 CELF6Q96J87 481 aaKnown RBP30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 GDAP1L1Q96MZ0 367 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 CNTNAP3BQ96NU0 1288 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 ELF4Q99607 663 aaPredicted RBP30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 CNTNAP3Q9BZ76 1288 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 GDF3Q9NR23 364 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 TP53BP1Q12888 1972 aaPredicted RBP30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 DOCK9Q9BZ29 2069 aa30.77■■■□□ 2.52
SSSCA1-207ENST00000533115 PCDHGA12O60330 932 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 ERCC2P18074 760 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 HCAR3P49019 387 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 NXPH1P58417 271 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 STAT4Q14765 748 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 ZNF284Q2VY69 593 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 ZNF805Q5CZA5 627 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 IQCHQ86VS3 1027 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 RNF214Q8ND24 703 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 VOPP1Q96AW1 172 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 NUP85Q9BW27 656 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 OSBPL1AQ9BXW6 950 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 SLC39A8Q9C0K1 460 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 WASF3Q9UPY6 502 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 FADS3Q9Y5Q0 445 aa30.76■■■□□ 2.51
SSSCA1-207ENST00000533115 TPRP12270 2363 aaKnown RBP30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 A0A1B0GTQ1 180 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 IL1R2P27930 398 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 EIF4A3P38919 411 aaKnown RBP30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 RHOAP61586 193 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 BOLA3Q53S33 107 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 PRAMEF14Q5SWL7 426 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 NETO2Q8NC67 525 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 RHBDD1Q8TEB9 315 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 KLK6Q92876 244 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 ARHGEF26Q96DR7 871 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 CWC15Q9P013 229 aaKnown RBP30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 UBA2Q9UBT2 640 aaPredicted RBP30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 IP6K2Q9UHH9 426 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 ANAPC7Q9UJX3 599 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 NENFQ9UMX5 172 aa30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 ZFR2Q9UPR6 939 aaKnown RBP30.75■■■□□ 2.51
SSSCA1-207ENST00000533115 ACACBO00763 2458 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 ARHGAP42A6NI28 874 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 C16orf96A6NNT2 1141 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 SLC31A1O15431 190 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 AP1G1O43747 822 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 IGSF6O95976 241 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 UGT2B4P06133 528 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 TCF4P15884 667 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 PRLRP16471 622 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 PAPOLAP51003 745 aaKnown RBP30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 IL9RQ01113 521 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 RAD51Q06609 339 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 OVGP1Q12889 678 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 CYTH1Q15438 398 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 VSTM4Q8IW00 320 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 NIPA2Q8N8Q9 360 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 OR8K1Q8NGG5 319 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 BTBD6Q96KE9 485 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 DNAJC7Q99615 494 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 ZWILCHQ9H900 591 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 PDFQ9HBH1 243 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 CHD8Q9HCK8 2581 aa30.74■■■□□ 2.51
SSSCA1-207ENST00000533115 J3KR12 359 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 MAGEC1O60732 1142 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 PRAMEF11O60813 436 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 DPYSL2Q16555 572 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 SMTNL2Q2TAL5 461 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 TMEM259Q4ZIN3 620 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 AFMIDQ63HM1 303 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 SEL1L3Q68CR1 1132 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 GDPD4Q6W3E5 623 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 TMEM145Q8NBT3 493 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 BAHD1Q8TBE0 780 aaPredicted RBP30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 RAB7BQ96AH8 199 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 FEM1CQ96JP0 617 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 KLHL32Q96NJ5 620 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 CA5BQ9Y2D0 317 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 BTBD3Q9Y2F9 522 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 MFHAS1Q9Y4C4 1052 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 CEP295Q9C0D2 2601 aa30.73■■■□□ 2.51
SSSCA1-207ENST00000533115 TOP3BO95985 862 aaKnown RBP30.72■■■□□ 2.51
SSSCA1-207ENST00000533115 RPS21P63220 83 aaKnown RBP30.72■■■□□ 2.51
SSSCA1-207ENST00000533115 DPYSQ14117 519 aa30.72■■■□□ 2.51
SSSCA1-207ENST00000533115 KIAA1161Q6NSJ0 714 aa30.72■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms