RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 EIF2B5Q13144 721 aaKnown RBP12.67□□□□□ -0.38
CAPN1-223ENST00000533079 SERINC3Q13530 473 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 UBAP2LQ14157 1087 aaKnown RBP12.67□□□□□ -0.38
CAPN1-223ENST00000533079 DRAP1Q14919 205 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-223ENST00000533079 PRRT3Q5FWE3 981 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 ARSIQ5FYB1 569 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 MANEAQ5SRI9 462 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 JAMLQ86YT9 394 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 PHACTR4Q8IZ21 702 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 SDR16C5Q8N3Y7 309 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 FSTL5Q8N475 847 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-223ENST00000533079 ARHGEF26Q96DR7 871 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 SLC2A13Q96QE2 648 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 GFM1Q96RP9 751 aaKnown RBP12.67□□□□□ -0.38
CAPN1-223ENST00000533079 PSMB7Q99436 277 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 C1QTNF2Q9BXJ5 285 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 RBSNQ9H1K0 784 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 SYNDIG1Q9H7V2 258 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 CAAP1Q9H8G2 361 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 WDR70Q9NW82 654 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 RMND1Q9NWS8 449 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 GEMIN8Q9NWZ8 242 aaKnown RBP12.67□□□□□ -0.38
CAPN1-223ENST00000533079 PADI4Q9UM07 663 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 HS3ST4Q9Y661 456 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 WASF2Q9Y6W5 498 aa12.67□□□□□ -0.38
CAPN1-223ENST00000533079 CXorf51AA0A1B0GTR3 108 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 SPINT1O43278 529 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 HSF2BPO75031 334 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 ZNF202O95125 648 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 MT-CO1P00395 513 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 RRM1P23921 792 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 BLKP51451 505 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 IRAK1P51617 712 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 NDUFA8P51970 172 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 PITX1P78337 314 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-223ENST00000533079 NFKB2Q00653 900 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 LVRNQ6Q4G3 990 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 ZNF783Q6ZMS7 281 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 MACC1Q6ZN28 852 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 KRBA2Q6ZNG9 492 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 RBFAQ8N0V3 343 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 PCDH20Q8N6Y1 951 aaKnown RBP12.66□□□□□ -0.38
CAPN1-223ENST00000533079 CHST14Q8NCH0 376 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 SCG3Q8WXD2 468 aaKnown RBP12.66□□□□□ -0.38
CAPN1-223ENST00000533079 B3GNT4Q9C0J1 378 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 TMEM51Q9NW97 253 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 CNTN6Q9UQ52 1028 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 PCDHB11Q9Y5F2 797 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 DOCK9Q9BZ29 2069 aa12.66□□□□□ -0.38
CAPN1-223ENST00000533079 RELNP78509 3460 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 A0A1W2PQC6 194 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 K7ERQ8 282 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 SMAD6O43541 496 aaKnown RBP12.65□□□□□ -0.38
CAPN1-223ENST00000533079 SNAP91O60641 907 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 GCATO75600 419 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 ALPIP09923 528 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 NOS2P35228 1153 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 SERPINH1P50454 418 aaKnown RBP12.65□□□□□ -0.38
CAPN1-223ENST00000533079 ADKP55263 362 aaKnown RBP12.65□□□□□ -0.38
CAPN1-223ENST00000533079 SLC20A2Q08357 652 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 PDCLQ13371 301 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 MORC3Q14149 939 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 ELOCQ15369 112 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 TBR1Q16650 682 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 EFHC1Q5JVL4 640 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 RETSATQ6NUM9 610 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 DPY19L3Q6ZPD9 716 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 PARS2Q7L3T8 475 aaKnown RBP12.65□□□□□ -0.38
CAPN1-223ENST00000533079 B3GNT8Q7Z7M8 397 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 KAT5Q92993 513 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 HEPHQ9BQS7 1158 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 C1QTNF7Q9BXJ2 289 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 GTPBP4Q9BZE4 634 aaKnown RBP12.65□□□□□ -0.38
CAPN1-223ENST00000533079 TUBD1Q9UJT1 453 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 PAXBP1Q9Y5B6 917 aa12.65□□□□□ -0.38
CAPN1-223ENST00000533079 SYNJ2BP-COX16A0A087WUM0 186 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-223ENST00000533079 RNF103O00237 685 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 YY2O15391 372 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 PAGE1O75459 146 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 TGIF1Q15583 401 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 BRMS1LQ5PSV4 323 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 TPRG1LQ5T0D9 272 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 DENND1BQ6P3S1 775 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 SASS6Q6UVJ0 657 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 PLPP6Q8IY26 295 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 SMYD4Q8IYR2 804 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-223ENST00000533079 DEFB106AQ8N104 65 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 ZNF564Q8TBZ8 553 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-223ENST00000533079 CCDC74AQ96AQ1 378 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 TNKS2Q9H2K2 1166 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 RRN3Q9NYV6 651 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 COX16Q9P0S2 106 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 PISDQ9UG56 409 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 DOLKQ9UPQ8 538 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 LOXL2Q9Y4K0 774 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 TDRD6O60522 2096 aaKnown RBP12.64□□□□□ -0.39
CAPN1-223ENST00000533079 FLNCQ14315 2725 aa12.64□□□□□ -0.39
CAPN1-223ENST00000533079 SCN8AQ9UQD0 1980 aa12.63□□□□□ -0.39
CAPN1-223ENST00000533079 CLEC18AA5D8T8 446 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms