RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 POLNQ7Z5Q5 900 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 TRIM69Q86WT6 500 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 GAS2L3Q86XJ1 694 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 ARHGAP12Q8IWW6 846 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 NPWQ8N729 165 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 TC2NQ8N9U0 490 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 NETO2Q8NC67 525 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 SLC6A18Q96N87 628 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 GRPEL1Q9HAV7 217 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 PDFQ9HBH1 243 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 DNAAF2Q9NVR5 837 aaKnown RBP15.62■□□□□ 0.09
CPSF1-210ENST00000532935 UBA2Q9UBT2 640 aaPredicted RBP15.62■□□□□ 0.09
CPSF1-210ENST00000532935 MED19A0JLT2 244 aaPredicted RBP15.61■□□□□ 0.09
CPSF1-210ENST00000532935 J3KR12 359 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 KRIT1O00522 736 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 PRAMEF11O60813 436 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 POP4O95707 220 aaKnown RBP15.61■□□□□ 0.09
CPSF1-210ENST00000532935 IGSF6O95976 241 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 KCNA4P22459 653 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 AMPD1P23109 780 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 ZNF75DP51815 510 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 NEK3P51956 506 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 RHOAP61586 193 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 RACK1P63244 317 aaKnown RBP15.61■□□□□ 0.09
CPSF1-210ENST00000532935 CYTH1Q15438 398 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 MYLK3Q32MK0 819 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 IL27RAQ6UWB1 636 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 LAYNQ6UX15 382 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 ADAT2Q7Z6V5 191 aaKnown RBP15.61■□□□□ 0.09
CPSF1-210ENST00000532935 PRPF39Q86UA1 669 aaKnown RBP15.61■□□□□ 0.09
CPSF1-210ENST00000532935 CPNE8Q86YQ8 564 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 LZTR1Q8N653 840 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 MRFAP1L1Q96HT8 127 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 LRIG1Q96JA1 1093 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 GDAP1L1Q96MZ0 367 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 CSPG4P5Q96PW8 444 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 PCDH18Q9HCL0 1135 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 LCMT1Q9UIC8 334 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 ANKRD6Q9Y2G4 727 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 NCOR2Q9Y618 2525 aa15.61■□□□□ 0.09
CPSF1-210ENST00000532935 LRRK1Q38SD2 2015 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 DFFAO00273 331 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 RNGTTO60942 597 aaKnown RBP15.6■□□□□ 0.09
CPSF1-210ENST00000532935 GJB3O75712 270 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 KCNK5O95279 499 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 CER1O95813 267 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 ADRB3P13945 408 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 MAT2AP31153 395 aaKnown RBP15.6■□□□□ 0.09
CPSF1-210ENST00000532935 NUDT1P36639 197 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 CDH6P55285 790 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 RAD51Q06609 339 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 KRT81Q14533 505 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 KIF19Q2TAC6 998 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 HLA-BQ31612 363 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 ZNF805Q5CZA5 627 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 NEK5Q6P3R8 708 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 PARS2Q7L3T8 475 aaKnown RBP15.6■□□□□ 0.09
CPSF1-210ENST00000532935 SLC35G2Q8TBE7 412 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 TSC1Q92574 1164 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 VOPP1Q96AW1 172 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 SERAC1Q96JX3 654 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 OSBPL1AQ9BXW6 950 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 GAREM1Q9H706 876 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 AASDHPPTQ9NRN7 309 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 ETNK2Q9NVF9 386 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 LHX3Q9UBR4 397 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 MFHAS1Q9Y4C4 1052 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 SNX11Q9Y5W9 270 aa15.6■□□□□ 0.09
CPSF1-210ENST00000532935 C16orf96A6NNT2 1141 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 UPK3BL1B0FP48 263 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 UPK3BL2E5RIL1 263 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 WNT9AO14904 365 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 VILLO15195 856 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 UGT2B4P06133 528 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 CSRP1P21291 193 aaKnown RBP15.59■□□□□ 0.09
CPSF1-210ENST00000532935 CD38P28907 300 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 MAN1A1P33908 653 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 GJC1P36383 396 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 NOVA1P51513 510 aaKnown RBP15.59■□□□□ 0.09
CPSF1-210ENST00000532935 SLC14A1Q13336 389 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 SETMARQ53H47 684 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-210ENST00000532935 PSAPL1Q6NUJ1 521 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 FBXL19Q6PCT2 694 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 TMCO3Q6UWJ1 677 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 GDPD4Q6W3E5 623 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 ARHGAP36Q6ZRI8 547 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 TP53INP2Q8IXH6 220 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 FAM71BQ8TC56 605 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 EXOC2Q96KP1 924 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 SP110Q9HB58 689 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 IL21RQ9HBE5 538 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 RCOR3Q9P2K3 495 aaPredicted RBP15.59■□□□□ 0.09
CPSF1-210ENST00000532935 INTUQ9ULD6 942 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 DMTF1Q9Y222 760 aa15.59■□□□□ 0.09
CPSF1-210ENST00000532935 A0A1W2PQU0 124 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 A0A1W2PR77 199 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 TMEM110-MUSTN1A8MSY1 372 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 AP1G1O43747 822 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 PALMO75781 387 aa15.58■□□□□ 0.08
CPSF1-210ENST00000532935 MTA2O94776 668 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms