RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 HACD2Q6Y1H2 254 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 SLC51AQ86UW1 340 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CBR4Q8N4T8 237 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 MYCT1Q8N699 235 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 FEZF2Q8TBJ5 459 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 USP13Q92995 863 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 FAM20AQ96MK3 541 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 FUNDC2Q9BWH2 189 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 LIN7BQ9HAP6 207 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 HOMER2Q9NSB8 354 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.23□□□□□ -1.091e-8■□□□□ 9.6
CSDE1-214ENST00000530886 ZNF639Q9UID6 485 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF330Q9Y3S2 320 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 GAS7O60861 476 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CCNKO75909 580 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CYP3A4P08684 503 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CSH1P0DML2 217 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CSH2P0DML3 217 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 RPL17P18621 184 aaKnown RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 TCN1P20061 433 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CFL1P23528 166 aaKnown RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 RBL1P28749 1068 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 PSMC5P62195 406 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CLCQ05315 142 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 SKIV2LQ15477 1246 aaKnown RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 TAF5Q15542 800 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 N4BP2L1Q5TBK1 243 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 SLCO6A1Q86UG4 719 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 CDR2LQ86X02 465 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 C10orf107Q8IVU9 208 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF444Q8N0Y2 327 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-214ENST00000530886 FBXL6Q8N531 539 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 IL17RDQ8NFM7 739 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 KCNN2Q9H2S1 579 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 VAT1LQ9HCJ6 419 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 TM9SF3Q9HD45 589 aa8.23□□□□□ -1.09
CSDE1-214ENST00000530886 PCNTO95613 3336 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 FAM25EA8MYX2 175 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 USP17L15C9J2P7 530 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 USP17L13C9JLJ4 530 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 USP17L11C9JVI0 530 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 USP17L18D6R9N7 530 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 USP17L22D6RA61 530 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 USP17L17D6RBQ6 530 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 USP17L19D6RCP7 530 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 USP17L20D6RJB6 530 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 CALCAP01258 141 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 CFHP08603 1231 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ENO3P13929 434 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 DSG3P32926 999 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 MSX2P35548 267 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 MAGEA3P43357 314 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 GCLMP48507 274 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 PSME3P61289 254 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 USP17L24Q0WX57 530 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 COL19A1Q14993 1142 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 GPR162Q16538 588 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 C5orf22Q49AR2 442 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 LDLRAP1Q5SW96 308 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 TTBK2Q6IQ55 1244 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 LMOD2Q6P5Q4 547 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 SYCE2Q6PIF2 218 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 USP17L6PQ6QN14 398 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 C15orf39Q6ZRI6 1047 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 PODNQ7Z5L7 613 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 RSAD2Q8WXG1 361 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 FIG4Q92562 907 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 METTL2AQ96IZ6 378 aaKnown RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 RIPOR3Q96MK2 946 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 DACH2Q96NX9 599 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 OR52B2Q96RD2 323 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF717Q9BY31 904 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 TMEM206Q9H813 350 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 TUFT1Q9NNX1 390 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 MOCS1Q9NZB8 636 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 VANGL2Q9ULK5 521 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 HEATR9A2RTY3 570 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 AQP12BA6NM10 295 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ZBTB5O15062 677 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 SYNCRIPO60506 623 aaKnown RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ADRB2P07550 413 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 PTGS2P35354 604 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 NDST1P52848 882 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 TNFAIP2Q03169 654 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ATP13A4Q4VNC1 1196 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 AQP12AQ8IXF9 295 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 DHRSXQ8N5I4 330 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 KIAA1958Q8N8K9 716 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 OR2T34Q8NGX1 318 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 OR2T3Q8NH03 318 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 MAPK15Q8TD08 544 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 LPGAT1Q92604 370 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 CDKL2Q92772 493 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ISL2Q96A47 359 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 RNF170Q96K19 258 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 CEP19Q96LK0 163 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 EIF2AK1Q9BQI3 630 aaKnown RBP8.22□□□□□ -1.09
CSDE1-214ENST00000530886 LRRC40Q9H9A6 602 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 ACOXLQ9NUZ1 547 aa8.22□□□□□ -1.09
CSDE1-214ENST00000530886 SMPD3Q9NY59 655 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms