RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 TPSB2P20231 275 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 RGRP47804 291 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 SEC13P55735 322 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 WNT3AP56704 352 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 SKOR1P84550 965 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 RAD51Q06609 339 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 MPP3Q13368 585 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 KCNJ11Q14654 390 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 E2F5Q15329 346 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 TPSAB1Q15661 275 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 PTPRNQ16849 979 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 MYLK3Q32MK0 819 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 EMC10Q5UCC4 262 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 SDE2Q6IQ49 451 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 C22orf39Q6P5X5 142 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 TXNDC11Q6PKC3 985 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ZDHHC24Q6UX98 284 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 PRPF39Q86UA1 669 aaKnown RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 HOOK3Q86VS8 718 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 CCDC25Q86WR0 208 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 GSPT2Q8IYD1 628 aaKnown RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 PCDH20Q8N6Y1 951 aaKnown RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 NAT8LQ8N9F0 302 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 DNAAF3Q8N9W5 541 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 OR6K2Q8NGY2 324 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ARRDC2Q8TBH0 407 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 FBXO25Q8TCJ0 367 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ATXN2LQ8WWM7 1075 aaKnown RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 FAM3CQ92520 227 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ISG20Q96AZ6 181 aaKnown RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 IFT43Q96FT9 208 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 OXNAD1Q96HP4 312 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ZNF419Q96HQ0 510 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 GDAP1L1Q96MZ0 367 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 APOL2Q9BQE5 337 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 MLPHQ9BV36 600 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 FICDQ9BVA6 458 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 FSD1LQ9BXM9 530 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 NEUROG2Q9H2A3 272 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 LRRC40Q9H9A6 602 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ZDHHC18Q9NUE0 388 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 HECAQ9UBI9 543 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 SUN2Q9UH99 717 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 EVLQ9UI08 416 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 FBXL21Q9UKT6 434 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 RAB21Q9UL25 225 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 CA14Q9ULX7 337 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 SORCS3Q9UPU3 1222 aa8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 FARP1Q9Y4F1 1045 aaPredicted RBP8.62□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 DOCK6Q96HP0 2047 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 C19orf67A6NJJ6 358 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ERI2A8K979 691 aaKnown RBP8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 K7EQS6 105 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 MAN2B1O00754 1011 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 USP12O75317 370 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ZNF821O75541 412 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 TMEM63AO94886 807 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 POP4O95707 220 aaKnown RBP8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 AP2A1O95782 977 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 GSRP00390 522 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 EGFP01133 1207 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 MMP2P08253 660 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 HLA-EP13747 358 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 DRD1P21728 446 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 CD72P21854 359 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 CA4P22748 312 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 TNFRSF8P28908 595 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 TIE1P35590 1138 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 WASP42768 502 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 MAGEA6P43360 314 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 MAPK8P45983 427 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 CSNK1DP48730 415 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 VASPP50552 380 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ARL4CP56559 192 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 AP1S1P61966 158 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 CDK16Q00536 496 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 CDK18Q07002 472 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 BCL2L1Q07817 233 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ZNF234Q14588 700 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 BRD3Q15059 726 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 MLF2Q15773 248 aaPredicted RBP8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 C2orf27AQ580R0 203 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 TMEM196Q5HYL7 178 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 RALGPS1Q5JS13 557 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 IER5LQ5T953 404 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 EGFLAMQ63HQ2 1017 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 FSTL4Q6MZW2 842 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 NCEH1Q6PIU2 408 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 KDELC1Q6UW63 502 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 SERPINA13PQ6UXR4 307 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 CEP128Q6ZU80 1094 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 TPRG1Q6ZUI0 275 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 Q6ZVU0 165 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 LINC00523Q86TU6 105 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 PDIK1LQ8N165 341 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ZCCHC9Q8N567 271 aaKnown RBP8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 SLC25A41Q8N5S1 370 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ZNF366Q8N895 744 aa8.61□□□□□ -1.03
NEDD8-MDP1-201ENST00000530579 ZNF513Q8N8E2 541 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms