RNA–Protein interactions for RNA: ENST00000530384.5

CCS-205, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,196 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-205ENST00000530384 PPP2CBP62714 309 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 PPP2CAP67775 309 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 SLC14A1Q13336 389 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 KRT81Q14533 505 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 MYLK3Q32MK0 819 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 PPM1JQ5JR12 505 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 TXNRD3NBQ6F5E7 133 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 FBXL19Q6PCT2 694 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 TMCO3Q6UWJ1 677 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 ADAT2Q7Z6V5 191 aaKnown RBP17.34■□□□□ 0.37
CCS-205ENST00000530384 ARHGAP12Q8IWW6 846 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 RHOT2Q8IXI1 618 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 TC2NQ8N9U0 490 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 KNL1Q8NG31 2342 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 CSPG4P5Q96PW8 444 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 EBF2Q9HAK2 575 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 SP110Q9HB58 689 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 PDFQ9HBH1 243 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 PCDH18Q9HCL0 1135 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 INTUQ9ULD6 942 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 DMTF1Q9Y222 760 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 DNAH14Q0VDD8 3507 aa17.34■□□□□ 0.37
CCS-205ENST00000530384 UPK3BL1B0FP48 263 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 UPK3BL2E5RIL1 263 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 J3KR12 359 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 RNF103O00237 685 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 DFFAO00273 331 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 ADRB3P13945 408 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 CSRP1P21291 193 aaKnown RBP17.33■□□□□ 0.36
CCS-205ENST00000530384 AMPD1P23109 780 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 SERPINB6P35237 376 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 CDH6P55285 790 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 SETMARQ53H47 684 aaPredicted RBP17.33■□□□□ 0.36
CCS-205ENST00000530384 SLC45A4Q5BKX6 768 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 ZNF805Q5CZA5 627 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 ATXN7L2Q5T6C5 722 aaPredicted RBP17.33■□□□□ 0.36
CCS-205ENST00000530384 GAS2L3Q86XJ1 694 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 NPWQ8N729 165 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 OR6K2Q8NGY2 324 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 SLC35G2Q8TBE7 412 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 SERAC1Q96JX3 654 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 AASDHPPTQ9NRN7 309 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 ANKRD6Q9Y2G4 727 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 MFHAS1Q9Y4C4 1052 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 DOCK9Q9BZ29 2069 aa17.33■□□□□ 0.36
CCS-205ENST00000530384 TRPM6Q9BX84 2022 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 VILLO15195 856 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 RNGTTO60942 597 aaKnown RBP17.32■□□□□ 0.36
CCS-205ENST00000530384 GJB3O75712 270 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 KCNK5O95279 499 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 KRT7P08729 469 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 ARHGAP25P42331 645 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 C21orf59P57076 290 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 BNC1Q01954 994 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 IL10RBQ08334 325 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 RFTN1Q14699 578 aaPredicted RBP17.32■□□□□ 0.36
CCS-205ENST00000530384 GRM3Q14832 879 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 CYTH1Q15438 398 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 NAPEPLDQ6IQ20 393 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 PARS2Q7L3T8 475 aaKnown RBP17.32■□□□□ 0.36
CCS-205ENST00000530384 OR2I1PQ8NGU4 316 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 FAM71BQ8TC56 605 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 RFFLQ8WZ73 363 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 TSC1Q92574 1164 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 RAB7BQ96AH8 199 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 SLC6A18Q96N87 628 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 CPEB1Q9BZB8 566 aaKnown RBP17.32■□□□□ 0.36
CCS-205ENST00000530384 SLC32A1Q9H598 525 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 GAREM1Q9H706 876 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 LHX3Q9UBR4 397 aa17.32■□□□□ 0.36
CCS-205ENST00000530384 TP53BP1Q12888 1972 aaPredicted RBP17.31■□□□□ 0.36
CCS-205ENST00000530384 SPTBN2O15020 2390 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 C16orf96A6NNT2 1141 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 AP1G1O43747 822 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 PALMO75781 387 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 MTA2O94776 668 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 PCDH8O95206 1070 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 UGT2B4P06133 528 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 ZNF883P0CG24 379 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 KCNA4P22459 653 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 CD38P28907 300 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 MAT2AP31153 395 aaKnown RBP17.31■□□□□ 0.36
CCS-205ENST00000530384 GKP32189 559 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 GJC1P36383 396 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 NOVA1P51513 510 aaKnown RBP17.31■□□□□ 0.36
CCS-205ENST00000530384 MESDQ14696 234 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 PDK2Q15119 407 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 KIF19Q2TAC6 998 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 HLA-BQ31612 363 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 GDPD4Q6W3E5 623 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 ZSCAN30Q86W11 494 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 HORMAD1Q86X24 394 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 MAP7D3Q8IWC1 876 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 CCDC170Q8IYT3 715 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 KCTD6Q8NC69 237 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 IPO11Q9UI26 975 aaKnown RBP17.31■□□□□ 0.36
CCS-205ENST00000530384 SNX11Q9Y5W9 270 aa17.31■□□□□ 0.36
CCS-205ENST00000530384 PCNX2A6NKB5 2137 aa17.3■□□□□ 0.36
CCS-205ENST00000530384 A0A1W2PQU0 124 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms