RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 RABEPKQ7Z6M1 372 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 RHOT1Q8IXI2 618 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 RYBPQ8N488 228 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 PQLC3Q8N755 202 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 ACRBPQ8NEB7 543 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 OR6K2Q8NGY2 324 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 C1orf216Q8TAB5 229 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 TCEAL3Q969E4 200 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 BIRC7Q96CA5 298 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 PPP1R16AQ96I34 528 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 CALR3Q96L12 384 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 GDAP1L1Q96MZ0 367 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 LACRTQ9GZZ8 138 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 ZDHHC6Q9H6R6 413 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 SP110Q9HB58 689 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 DYRK4Q9NR20 520 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 LHX3Q9UBR4 397 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 SUSD2Q9UGT4 822 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 EIF2B4Q9UI10 523 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 SLC6A14Q9UN76 642 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 DUSP10Q9Y6W6 482 aa12.87□□□□□ -0.35
CCDC90B-216ENST00000529856 TBC1D3DA0A087WVF3 549 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TBC1D3IA0A087WXS9 549 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TBC1D3EA0A087X179 549 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TBC1D3KA0A087X1G2 549 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 A0A1B0GTW7 788 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 LRRD1A4D1F6 860 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TBC1D3FA6NER0 549 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TBC1D3LB9A6J9 549 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 KRIT1O00522 736 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 SPOPO43791 374 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 GDF9O60383 454 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 MAFKO60675 156 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 PALMO75781 387 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 PEX11BO96011 259 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 SERPINF2P08697 491 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TBC1D3HP0C7X1 549 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 GNSP15586 552 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 ITGB7P26010 798 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 CD27P26842 260 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 GKP32189 559 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 CSNK1DP48730 415 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 CCR5P51681 352 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 VAV2P52735 878 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TAS2R38P59533 333 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 RAD51Q06609 339 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 AASDHQ4L235 1098 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 NCBP2-AS2Q69YL0 99 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TBC1D3GQ6DHY5 549 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TBC1D3CQ6IPX1 549 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 C11orf63Q6NUN7 778 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 VSIG1Q86XK7 387 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 LRRC49Q8IUZ0 686 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TBC1D3Q8IZP1 549 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 TPCN2Q8NHX9 752 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 SNX19Q92543 992 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 ZNF599Q96NL3 588 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 RNF157Q96PX1 679 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 ORAI3Q9BRQ5 295 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 NUSAP1Q9BXS6 441 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 OSBPL1AQ9BXW6 950 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 CPEB1Q9BZB8 566 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 MIR1-1HGQ9H1L0 117 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 CAPN10Q9HC96 672 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 RXFP3Q9NSD7 469 aa12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 DDX56Q9NY93 547 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-216ENST00000529856 LAMA1P25391 3075 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 LNP1A1A4G5 178 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 BCAT2O15382 392 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 INSIG1O15503 277 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 MFSD11O43934 449 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 CFIP05156 583 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 UGT2B4P06133 528 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 TNNT1P13805 278 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 NSUN2Q08J23 767 aaKnown RBP eCLIP12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 SLC10A7Q0GE19 358 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 GALNT2Q10471 571 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 LBRQ14739 615 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 ZNF805Q5CZA5 627 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 TMCO4Q5TGY1 634 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 GDPD4Q6W3E5 623 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 KIAA1328Q86T90 577 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 TSEN2Q8NCE0 465 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 EXOC2Q96KP1 924 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 CINPQ9BW66 212 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 GOLPH3Q9H4A6 298 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 EBF2Q9HAK2 575 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 PREBQ9HCU5 417 aa12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 TPX2Q9ULW0 747 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-216ENST00000529856 DMXL1Q9Y485 3027 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 A0A1W2PPC4 97 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 C16orf96A6NNT2 1141 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 LATO43561 262 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 PSTPIP1O43586 416 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 KRT1P04264 644 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 ADRB3P13945 408 aa12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 GARSP41250 739 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-216ENST00000529856 RGRP47804 291 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms