RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ADAM22Q9P0K1 906 aa22.77■■□□□ 1.24
TRAPPC4-208ENST00000527680 IGLON5A6NGN9 336 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 C2CD4BA6NLJ0 364 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 C16orf96A6NNT2 1141 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 FAM72CH0Y354 149 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 FPGTO14772 594 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 LRIG2O94898 1065 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 CD160O95971 181 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 MT-CO3P00414 261 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 HNRNPKP61978 463 aaKnown RBP eCLIP22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 SNRPD1P62314 119 aaKnown RBP22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 NRG1Q02297 640 aaPredicted RBP22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 FGL2Q14314 439 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 FAM72AQ5TYM5 149 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 FAM72DQ6L9T8 149 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 FAM72BQ86X60 149 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 PLPP6Q8IY26 295 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 FAM172AQ8WUF8 416 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 TBC1D31Q96DN5 1066 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 IFT43Q96FT9 208 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 CRELD1Q96HD1 420 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 ABCG4Q9H172 646 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 SEPT11Q9NVA2 429 aaKnown RBP22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 TMEM248Q9NWD8 314 aa22.76■■□□□ 1.23
TRAPPC4-208ENST00000527680 TSPAN6O43657 245 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 AP1G1O43747 822 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 RAMP2O60895 175 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 POP4O95707 220 aaKnown RBP22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 MYF5P13349 255 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 ITPKBP27987 946 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 EIF2S3P41091 472 aaKnown RBP22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 PTPN9P43378 593 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 ZNF805Q5CZA5 627 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 SCYL2Q6P3W7 929 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 CACTIN-AS1Q8N1I8 211 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 CCDC185Q8N715 623 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 ANKRD20A12PQ8NF67 263 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 RFFLQ8WZ73 363 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 BAP1Q92560 729 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 RAB7BQ96AH8 199 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 APOLD1Q96LR9 279 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 DUSP23Q9BVJ7 150 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 EVA1BQ9NVM1 165 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 FANCLQ9NW38 375 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 NLGN3Q9NZ94 848 aa22.75■■□□□ 1.23
TRAPPC4-208ENST00000527680 H3BM21 787 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 SCAMP1O15126 338 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 EPHB6O15197 1021 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 RAD51BO15315 384 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 BUB1O43683 1085 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 TLX3O43711 291 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 NEBLO76041 1014 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 UGT2B4P06133 528 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 CKMT1AP12532 417 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 GPD1P21695 349 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 RFC1P35251 1148 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 RABIFP47224 123 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 DUSP3P51452 185 aaPredicted RBP22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 JAM2P57087 298 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 MYLK3Q32MK0 819 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 MANEALQ5VSG8 457 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 CDKAL1Q5VV42 579 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 KYAT3Q6YP21 454 aaKnown RBP22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 SLFN11Q7Z7L1 901 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 TTC7BQ86TV6 843 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 NLRP14Q86W24 1093 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 DCBLD1Q8N8Z6 715 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 NEK11Q8NG66 645 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 OR2AP1Q8NGE2 309 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 FGF11Q92914 225 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 KLHL32Q96NJ5 620 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 PCDHB18PQ96TA0 734 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 ITPR1Q14643 2758 aa22.74■■□□□ 1.23
TRAPPC4-208ENST00000527680 SPTY2D1-AS1A0A0U1RR47 76 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 CXorf51AA0A1B0GTR3 108 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 KDELR3O43731 214 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 BRINP1O60477 761 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 GSRP00390 522 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 UNGP13051 313 aaPredicted RBP22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 CDK11BP21127 795 aaKnown RBP22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 ACTN2P35609 894 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 HDAC4P56524 1084 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 RAD51Q06609 339 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 PDE1CQ14123 709 aaPredicted RBP22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 FZD2Q14332 565 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 ZSCAN30Q86W11 494 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 CENPIQ92674 756 aaPredicted RBP22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 ARHGEF26Q96DR7 871 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 C1QTNF2Q9BXJ5 285 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 DAAM1Q9Y4D1 1078 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 BAHCC1Q9P281 2608 aa22.73■■□□□ 1.23
TRAPPC4-208ENST00000527680 ANKRD62A6NC57 917 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 K7ESM1 405 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 OPA1O60313 960 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 CSF2P04141 144 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 CALB1P05937 261 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 GIMD1P0DJR0 217 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 ATXN7L2Q5T6C5 722 aaPredicted RBP22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 WDR59Q6PJI9 974 aa22.72■■□□□ 1.23
TRAPPC4-208ENST00000527680 GDPD4Q6W3E5 623 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms