RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 ZNF182P17025 639 aaPredicted RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 ITGA2P17301 1181 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ABCB4P21439 1286 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 F8A1P23610 371 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ADRA1DP25100 572 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 CD40LGP29965 261 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 HTR2BP41595 481 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 STAT1P42224 750 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 GNPDA1P46926 289 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 NPY2RP49146 381 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ADCY7P51828 1080 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 HK2P52789 917 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ITGA8P53708 1063 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 PRKAA2P54646 552 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ERVK-21P61565 698 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 GPLD1P80108 840 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 CD83Q01151 205 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 OTUD4Q01804 1114 aaKnown RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 BFSP1Q12934 665 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 BNIP2Q12982 314 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ALX1Q15699 326 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 PKN2Q16513 984 aaKnown RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 TAF12Q16514 161 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 CCNG2Q16589 344 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ZNF181Q2M3W8 571 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 TMEM67Q5HYA8 995 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 CACHD1Q5VU97 1274 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 IRAK1BP1Q5VVH5 260 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 AGAP6Q5VW22 663 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 TMEM132EQ6IEE7 984 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 C16orf89Q6UX73 402 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ZNF571Q7Z3V5 609 aaPredicted RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 ANKS1BQ7Z6G8 1248 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 TFAP2DQ7Z6R9 452 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 SPATA2LQ8IUW3 424 aaPredicted RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 WDR49Q8IV35 697 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ZC3H7AQ8IWR0 971 aaKnown RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 CTAGE3PQ8IX95 158 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ETFBKMTQ8IXQ9 262 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 C12orf56Q8IXR9 622 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 FAM9CQ8IZT9 166 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 C4orf33Q8N1A6 199 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 GUF1Q8N442 669 aaKnown RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 ZNF276Q8N554 614 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 DTWD1Q8N5C7 304 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 PI4KAP1Q8N8J0 262 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 DTX3Q8N9I9 347 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 PSD4Q8NDX1 1056 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 FLCNQ8NFG4 579 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 OR7D4Q8NG98 312 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 OR13F1Q8NGS4 319 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 VANGL1Q8TAA9 524 aaPredicted RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 TEX47Q8TBZ9 253 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 KCTD4Q8WVF5 259 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 SLC44A1Q8WWI5 657 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ERLEC1Q96DZ1 483 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 SUCLG2Q96I99 432 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 HEXIM2Q96MH2 286 aaKnown RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 AGAP4Q96P64 663 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ZSWIM1Q9BR11 485 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 BTBD2Q9BX70 525 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 SMG9Q9H0W8 520 aaKnown RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 WNT8AQ9H1J5 351 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 SLC6A17Q9H1V8 727 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 SLC6A15Q9H2J7 730 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 LY9Q9HBG7 655 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 TRIM39Q9HCM9 518 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 PRDM8Q9NQV8 689 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 CYP26B1Q9NR63 512 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 CHST12Q9NRB3 414 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 C20orf96Q9NUD7 363 aaPredicted RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 DDX28Q9NUL7 540 aaKnown RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 ACOXLQ9NUZ1 547 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 SIRT5Q9NXA8 310 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 B3GNT2Q9NY97 397 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 IL37Q9NZH6 218 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ACTR3BQ9P1U1 418 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 EIF3KQ9UBQ5 218 aaKnown RBP5.89□□□□□ -1.47
CD44-225ENST00000527326 FAM8A1Q9UBU6 413 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 FBXO40Q9UH90 709 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 BAG5Q9UL15 447 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 STRIP2Q9ULQ0 834 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 SLC45A1Q9Y2W3 748 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 COL4A3BPQ9Y5P4 624 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 ST14Q9Y5Y6 855 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 KCNE2Q9Y6J6 123 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 UBE4BO95155 1302 aa5.89□□□□□ -1.47
CD44-225ENST00000527326 MON2Q7Z3U7 1717 aa5.88□□□□□ -1.47
CD44-225ENST00000527326 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.88□□□□□ -1.47
CD44-225ENST00000527326 A0A0G2JLW4 131 aa5.88□□□□□ -1.47
CD44-225ENST00000527326 FAM237BA0A1B0GVD1 139 aa5.88□□□□□ -1.47
CD44-225ENST00000527326 ZNF98A6NK75 572 aa5.88□□□□□ -1.47
CD44-225ENST00000527326 FOXO6A8MYZ6 492 aa5.88□□□□□ -1.47
CD44-225ENST00000527326 PRR5-ARHGAP8B1AHC4 643 aa5.88□□□□□ -1.47
CD44-225ENST00000527326 ZNF487B1APH4 448 aa5.88□□□□□ -1.47
CD44-225ENST00000527326 C19orf81C9J6K1 198 aa5.88□□□□□ -1.47
CD44-225ENST00000527326 POC1B-GALNT4F8VUJ3 575 aa5.88□□□□□ -1.47
CD44-225ENST00000527326 ARHGEF9O43307 516 aa5.88□□□□□ -1.47
CD44-225ENST00000527326 GATCO43716 136 aaKnown RBP5.88□□□□□ -1.47
CD44-225ENST00000527326 LRRN2O75325 713 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms