RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 MYBPC3Q14896 1274 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 KCNA10Q16322 511 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 ZYG11AQ6WRX3 759 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 TMEM135Q86UB9 458 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 TMEM126BQ8IUX1 230 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 TSPAN14Q8NG11 270 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 SLC2A14Q8TDB8 520 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 OMDQ99983 421 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 HAUS8Q9BT25 410 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 SENP6Q9GZR1 1112 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-208ENST00000527323 MAF1Q9H063 256 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 SNX25Q9H3E2 840 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 A0A1B0GTW7 788 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 ARHGEF37A1IGU5 675 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 CABYRO75952 493 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 LMO2P25791 158 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 SLC26A2P50443 739 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 ADARP55265 1226 aaKnown RBP12.67□□□□□ -0.38
CAPN1-208ENST00000527323 ANO4Q32M45 955 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 CLEC14AQ86T13 490 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 C18orf25Q96B23 403 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-208ENST00000527323 PPWD1Q96BP3 646 aaKnown RBP12.67□□□□□ -0.38
CAPN1-208ENST00000527323 PCDHAC1Q9H158 963 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 RNF39Q9H2S5 420 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 COQ10BQ9H8M1 238 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 SNTG2Q9NY99 539 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 GTSE1Q9NYZ3 720 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 VTI1BQ9UEU0 232 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 AP4S1Q9Y587 144 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 SNX13Q9Y5W8 968 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 MYO7AQ13402 2215 aa12.67□□□□□ -0.38
CAPN1-208ENST00000527323 MYO9BQ13459 2157 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 ZBTB24O43167 697 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 AP2A1O95782 977 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 CDK4P11802 303 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 PTPN3P26045 913 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 ACADSBP45954 432 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 GALK1P51570 392 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 FAM187BQ17R55 369 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 SLC25A52Q3SY17 297 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 PDZD4Q76G19 769 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 TICAM1Q8IUC6 712 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 GOLGA2P5Q9HBQ8 144 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 ZBTB26Q9HCK0 441 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 DNAAF2Q9NVR5 837 aaKnown RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 TUBGCP4Q9UGJ1 667 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 VPS28Q9UK41 221 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 COPG1Q9Y678 874 aaKnown RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 TRIP11Q15643 1979 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 PRSS51A0A1B0GVH4 220 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 TMEM233B4DJY2 109 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 SLCO1B7G3V0H7 640 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 TRIM38O00635 465 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 STAU1O95793 577 aaKnown RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 SLC5A2P31639 672 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 PSEN2P49810 448 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 CSE1LP55060 971 aaKnown RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 PSME3P61289 254 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 ADIGQ0VDE8 80 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 PDAP1Q13442 181 aaKnown RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 ADRM1Q16186 407 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 MGAT5BQ3V5L5 792 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 GK5Q6ZS86 529 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 FSTL5Q8N475 847 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 CPSF7Q8N684 471 aaKnown RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 ISL2Q96A47 359 aa12.66□□□□□ -0.38
CAPN1-208ENST00000527323 RBM38Q9H0Z9 239 aaKnown RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 CHCHD3Q9NX63 227 aaKnown RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 RCOR3Q9P2K3 495 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-208ENST00000527323 KCNU1A8MYU2 1149 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 PTPN1P18031 435 aaKnown RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 ERCC2P18074 760 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 NMBRP28336 390 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 DCTN2Q13561 401 aaKnown RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 ARHGAP17Q68EM7 881 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 GDF6Q6KF10 455 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 CYP2R1Q6VVX0 501 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 CATSPER4Q7RTX7 472 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 SLC41A1Q8IVJ1 513 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 BEST2Q8NFU1 509 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 LRTOMTQ8WZ04 291 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 ZMAT2Q96NC0 199 aaKnown RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 TMEM79Q9BSE2 394 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 NFKBIZQ9BYH8 718 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 SUDS3Q9H7L9 328 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 LIN28AQ9H9Z2 209 aaKnown RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 AKR1A1P14550 325 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 MFSD14CQ5VZR4 134 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 LAYNQ6UX15 382 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 UNC93AQ86WB7 457 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 NT5DC4Q86YG4 428 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 MYO1HQ8N1T3 1032 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 CNTD1Q8N815 330 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 TMEM102Q8N9M5 508 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 ITFG2Q969R8 447 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 TMIGD2Q96BF3 282 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 FAM124BQ9H5Z6 455 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-208ENST00000527323 TIMMDC1Q9NPL8 285 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 ACOT9Q9Y305 439 aa12.65□□□□□ -0.38
CAPN1-208ENST00000527323 PTCH2Q9Y6C5 1203 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms