RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 USP29Q9HBJ7 922 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 CABP5Q9NP86 173 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 RIC8AQ9NPQ8 531 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 SDHAF3Q9NRP4 125 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 TBC1D23Q9NUY8 699 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PLK2Q9NYY3 685 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 IL37Q9NZH6 218 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 B4GALT6Q9UBX8 382 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 EVLQ9UI08 416 aaPredicted RBP3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 MAPRE3Q9UPY8 281 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 DMTF1Q9Y222 760 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 SNX5Q9Y5X3 404 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 MYH7BA7E2Y1 1941 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 MYH6P13533 1939 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 PBRM1Q86U86 1689 aa3.81□□□□□ -1.8
CLNS1A-209ENST00000527299 DIP2AQ14689 1571 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 GRIN2BQ13224 1484 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 RIMS2Q9UQ26 1411 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CPDO75976 1380 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 MYH8P13535 1937 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF804BA4D1E1 1349 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 MAP3K19Q56UN5 1328 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 UMODL1Q5DID0 1318 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 WDR19Q8NEZ3 1342 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF335Q9H4Z2 1342 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 KDM3AQ9Y4C1 1321 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 PSME4Q14997 1843 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CYP2D7A0A087X1C5 515 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ST20-MTHFSA0A0A6YYL1 179 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 C1orf232A0A0U1RR37 186 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ANO9A1A5B4 782 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 MAGEB16A2A368 324 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 OR5K3A6NET4 321 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 TBX3O15119 743 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 KPNA5O15131 536 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 VILLO15195 856 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 PEX1O43933 1283 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 TSC22D2O75157 780 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 KATNA1O75449 491 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 GMNNO75496 209 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ARIH2O95376 493 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 PLEKHA8P1O95397 391 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 POP4O95707 220 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ONECUT2O95948 504 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ELANEP08246 267 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 UBTFL6P0CB48 400 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 OCM2P0CE71 109 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 OCMP0CE72 109 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 KRT10P13645 584 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 P4HA1P13674 534 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ETS2P15036 469 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CPA1P15085 419 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 HSPA6P17066 643 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SDSP20132 328 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 TCEA1P23193 301 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 IGFALSP35858 605 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 LONP1P36776 959 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 GPD2P43304 727 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 PTPN9P43378 593 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ASMTP46597 345 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 RPL5P46777 297 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ME1P48163 572 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 TRAPPC10P48553 1259 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 VPS41P49754 854 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 RGS7P49802 495 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ETV1P50549 477 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF135P52742 658 aaPredicted RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 VBP1P61758 197 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 FCHO2Q0JRZ9 810 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CDC20Q12834 499 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 RALGDSQ12967 914 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 IDI1Q13907 227 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 HNRNPDQ14103 355 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ANKRD1Q15327 319 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CNGA2Q16280 664 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 RGS21Q2M5E4 152 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 LETM2Q2VYF4 491 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CCDC58Q4VC31 144 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 C12orf60Q5U649 245 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SDE2Q6IQ49 451 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 PLBD1Q6P4A8 553 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 SLC4A10Q6U841 1118 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ABRAXAS1Q6UWZ7 409 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ANGPTL8Q6UXH0 198 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF788Q6ZQV5 615 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 STOX1Q6ZVD7 989 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 RTL10Q7L3V2 364 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 MIER3Q7Z3K6 550 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 GLRX5Q86SX6 157 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 AKAP14Q86UN6 197 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ZNF677Q86XU0 584 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 GATAD2AQ86YP4 633 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 ERI1Q8IV48 349 aaKnown RBP3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CCDC28AQ8IWP9 274 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CDH26Q8IXH8 852 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 FBXL16Q8N461 479 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 CSGALNACT2Q8N6G5 542 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 NKAIN3Q8N8D7 197 aa3.8□□□□□ -1.8
CLNS1A-209ENST00000527299 TEX19Q8NA77 164 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms