RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TAF4O00268 1085 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 RAD51BO15315 384 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 INSIG1O15503 277 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 RASA4O43374 803 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 TNFSF14O43557 240 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 BUB1O43683 1085 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 TMCC1O94876 653 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 PCDH8O95206 1070 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 GSRP00390 522 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 ITGAVP06756 1048 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 ADRB3P13945 408 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 ITIH2P19823 946 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 PSMA2P25787 234 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 EPHA8P29322 1005 aaPredicted RBP10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 NUDT1P36639 197 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 ETFBP38117 255 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 NEK3P51956 506 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 FANCCQ00597 558 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 STAT4Q14765 748 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 CYTH1Q15438 398 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 KLHL40Q2TBA0 621 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 SLC45A4Q5BKX6 768 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 HGSNATQ68CP4 663 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 KDM7AQ6ZMT4 941 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 GCNT7Q6ZNI0 430 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 TMPRSS7Q7RTY8 843 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 UMODL1-AS1Q8N2C9 162 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 RYBPQ8N488 228 aaPredicted RBP10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 EID2Q8N6I1 236 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 OR2AP1Q8NGE2 309 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 SKA1Q96BD8 255 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 KLHDC7BQ96G42 594 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 BMFQ96LC9 184 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 KCTD15Q96SI1 283 aaPredicted RBP10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 EDEM3Q9BZQ6 932 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 DYRK4Q9NR20 520 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 PARVAQ9NVD7 372 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 ITM2BQ9Y287 266 aa10.61□□□□□ -0.71
PRPF40B-204ENST00000527253 ANKRD62A6NC57 917 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 C16orf96A6NNT2 1141 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 KRIT1O00522 736 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 PAK4O96013 591 aaPredicted RBP10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 SERPINC1P01008 464 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 THEGLP0DJG4 465 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 GZMAP12544 262 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 MIPP30301 263 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 AIF1P55008 147 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 CLDN6P56747 220 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 YBEYP58557 167 aaPredicted RBP10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 KLHL30Q0D2K2 578 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 OVGP1Q12889 678 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 DNAJC3Q13217 504 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 SERINC3Q13530 473 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 ZNF805Q5CZA5 627 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 FIGNQ5HY92 759 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 FBXL19Q6PCT2 694 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 ABI3BPQ7Z7G0 1075 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 SLC22A18ASQ8N1D0 253 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 SLC25A45Q8N413 288 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 OR13H1Q8NG92 308 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 PPP1R16AQ96I34 528 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 CELF6Q96J87 481 aaKnown RBP10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 KLHL32Q96NJ5 620 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 KLF6Q99612 283 aaPredicted RBP10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 EPAS1Q99814 870 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 SNRNP25Q9BV90 132 aaKnown RBP10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 C1QTNF2Q9BXJ5 285 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 SLC17A9Q9BYT1 436 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 SLC39A8Q9C0K1 460 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 LRRC19Q9H756 370 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 PDFQ9HBH1 243 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 LHX3Q9UBR4 397 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 FTSJ1Q9UET6 329 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 CNOT8Q9UFF9 292 aaKnown RBP10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 PCSK1NQ9UHG2 260 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 HPCAL4Q9UM19 191 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 ZFYVE26Q68DK2 2539 aa10.6□□□□□ -0.71
PRPF40B-204ENST00000527253 TDRD6O60522 2096 aaKnown RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 ANKRD11Q6UB99 2663 aaPredicted RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 FAM149AA5PLN7 773 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 POM121BA6NF01 834 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 IGLON5A6NGN9 336 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 SRRM3A6NNA2 597 aaPredicted RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 J3KR12 359 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 AREL1O15033 823 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 AP1G1O43747 822 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 SDC3O75056 442 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 POP4O95707 220 aaKnown RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 LDOC1O95751 146 aaPredicted RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 UGT2B4P06133 528 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 GIMD1P0DJR0 217 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 TCF4P15884 667 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 TIMP2P16035 220 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 HNRNPA2B1P22626 353 aaKnown RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 AKT2P31751 481 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 ARRB1P49407 418 aaPredicted RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 GEMIN4P57678 1058 aaKnown RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 SNRPD1P62314 119 aaKnown RBP10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 CCDC15Q0P6D6 951 aa10.59□□□□□ -0.71
PRPF40B-204ENST00000527253 INO80DQ53TQ3 878 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms