RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 DDHD2O94830 711 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 ENO3P13929 434 aaPredicted RBP12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 RAG1P15918 1043 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 TSPAN8P19075 237 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 WARSP23381 471 aaKnown RBP12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 DSG1Q02413 1049 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 KLF10Q13118 480 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 IRGCQ6NXR0 463 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 SLC30A9Q6PML9 568 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 ARHGAP22Q7Z5H3 698 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 TMCO2Q7Z6W1 182 aaPredicted RBP12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 APBB2Q92870 758 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 NT5C3BQ969T7 300 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 SLC2A13Q96QE2 648 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 FICDQ9BVA6 458 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 CDH19Q9H159 772 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 S100A14Q9HCY8 104 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 TCF7L2Q9NQB0 619 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 POMPQ9Y244 141 aa12.14□□□□□ -0.47
CHMP1B-201ENST00000526991 AHSGP02765 367 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 HNRNPLP14866 589 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 GABRB3P28472 473 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 RPL34P49207 117 aaKnown RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 MBTPS1Q14703 1052 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 SLC39A12Q504Y0 691 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 FOXB2Q5VYV0 432 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 OVOS1Q6IE37 1185 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 PTAR1Q7Z6K3 402 aaPredicted RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 LDB1Q86U70 411 aaPredicted RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 TMEM135Q86UB9 458 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 RTN4RL1Q86UN2 441 aaPredicted RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 ZNF354CQ86Y25 554 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 RAB3IL1Q8TBN0 382 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 NAT9Q9BTE0 207 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 EIF2B3Q9NR50 452 aaKnown RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 DNAAF2Q9NVR5 837 aaKnown RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 SPATA7Q9P0W8 599 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 ZDHHC2Q9UIJ5 367 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 SLC27A5Q9Y2P5 690 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 C9IYK1 514 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 RNASEH1O60930 286 aaKnown RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 TBX18O95935 607 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 AQP4P55087 323 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 PPIDQ08752 370 aaKnown RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 CNGA3Q16281 694 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 ARL13BQ3SXY8 428 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 FAM91A1Q658Y4 838 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 FAM117BQ6P1L5 589 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 PDZD4Q76G19 769 aaPredicted RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 SDCCAG8Q86SQ7 713 aaPredicted RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 CEP97Q8IW35 865 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 TOP6BLQ8N6T0 577 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 ATAD1Q8NBU5 361 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 NXNL1Q96CM4 212 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 TSC22D3Q99576 134 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 SLX1AQ9BQ83 275 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 BRD8Q9H0E9 1235 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 GBA3Q9H227 469 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 VCXQ9H320 206 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 CHST12Q9NRB3 414 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 RCOR3Q9P2K3 495 aaPredicted RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 MTF2Q9Y483 593 aaPredicted RBP12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 PCDHB12Q9Y5F1 795 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 SCN10AQ9Y5Y9 1956 aa12.13□□□□□ -0.47
CHMP1B-201ENST00000526991 CXCR3P49682 368 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 ACLYP53396 1101 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 MAXP61244 160 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 ITKQ08881 620 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 LSM12Q3MHD2 195 aaKnown RBP12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 XKR4Q5GH76 650 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 RBM12BQ8IXT5 1001 aaKnown RBP12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 SDR16C5Q8N3Y7 309 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 TMCO5AQ8N6Q1 288 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 ZSCAN18Q8TBC5 510 aaPredicted RBP12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 GDPD5Q8WTR4 605 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 CMTM5Q96DZ9 223 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 CASS4Q9NQ75 786 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 XPR1Q9UBH6 696 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 F8W8V4 182 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 GABRDO14764 452 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 HARS2P49590 506 aaKnown RBP12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 OR52E8Q6IFG1 317 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 TFAP2DQ7Z6R9 452 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 FSTL5Q8N475 847 aaPredicted RBP12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 SCLYQ96I15 445 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 CAPNS2Q96L46 248 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 ANKRD27Q96NW4 1050 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 GCNAQ96QF7 691 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 CDRT15Q96T59 188 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 ILKAPQ9H0C8 392 aaPredicted RBP12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 CDY1Q9Y6F8 540 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 BUD23O43709 281 aaKnown RBP12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 TOMM70O94826 608 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 LYNP07948 512 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 LRPAP1P30533 357 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 CLCN2P51788 898 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 CCDC153Q494R4 210 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 EPGNQ6UW88 154 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 CYS1Q717R9 158 aa12.12□□□□□ -0.47
CHMP1B-201ENST00000526991 TMC7Q7Z402 723 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms