RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 MAPK8P45983 427 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 NR2C2P49116 596 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 ADPRHP54922 357 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 NAP1L1P55209 391 aaKnown RBP17.52■□□□□ 0.4
LMX1B-203ENST00000526117 TFDP2Q14188 446 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 CSRP2Q16527 193 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 ARSIQ5FYB1 569 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 TFDP3Q5H9I0 405 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 RALGPS1Q5JS13 557 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 SYCP2LQ5T4T6 812 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 AGBL4Q5VU57 503 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 TIGD7Q6NT04 549 aaPredicted RBP17.52■□□□□ 0.4
LMX1B-203ENST00000526117 MFSD7Q6UXD7 560 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 CYP2U1Q7Z449 544 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 NT5DC3Q86UY8 548 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 SYT12Q8IV01 421 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 TEX26Q8N6G2 289 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 SPOCK2Q92563 424 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 MAML1Q92585 1016 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 ANP32BQ92688 251 aaKnown RBP17.52■□□□□ 0.4
LMX1B-203ENST00000526117 TUBGCP5Q96RT8 1024 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 VPS45Q9NRW7 570 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 DKK3Q9UBP4 350 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 PILRBQ9UKJ0 227 aa17.52■□□□□ 0.4
LMX1B-203ENST00000526117 GPR179Q6PRD1 2367 aa17.52■□□□□ 0.39
LMX1B-203ENST00000526117 THADAQ6YHU6 1953 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 MIF4GDA9UHW6 222 aaKnown RBP17.51■□□□□ 0.39
LMX1B-203ENST00000526117 APOL1O14791 398 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 BNIP3LO60238 219 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 ZNF806P0C7X5 589 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 NUDT1P36639 197 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 DHPSP49366 369 aaPredicted RBP17.51■□□□□ 0.39
LMX1B-203ENST00000526117 PEX5P50542 639 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 DNA2P51530 1060 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 CCR5P51681 352 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 CNTN1Q12860 1018 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 HNRNPDQ14103 355 aaKnown RBP17.51■□□□□ 0.39
LMX1B-203ENST00000526117 LBRQ14739 615 aaKnown RBP17.51■□□□□ 0.39
LMX1B-203ENST00000526117 WDR45BQ5MNZ6 344 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 PIP5KL1Q5T9C9 394 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 NEK5Q6P3R8 708 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 LEKR1Q6ZMV7 388 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 SPOCD1Q6ZMY3 1216 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 ERN2Q76MJ5 926 aaKnown RBP17.51■□□□□ 0.39
LMX1B-203ENST00000526117 ZSCAN30Q86W11 494 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.51■□□□□ 0.39
LMX1B-203ENST00000526117 KRT35Q92764 455 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 RAB7BQ96AH8 199 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 HSPA12BQ96MM6 686 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 OLFM3Q96PB7 478 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 MGME1Q9BQP7 344 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 MAK16Q9BXY0 300 aaKnown RBP17.51■□□□□ 0.39
LMX1B-203ENST00000526117 BRD8Q9H0E9 1235 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 PREBQ9HCU5 417 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 DYRK4Q9NR20 520 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 TRIM10Q9UDY6 481 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 EVLQ9UI08 416 aaPredicted RBP17.51■□□□□ 0.39
LMX1B-203ENST00000526117 LAMA1P25391 3075 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 CEP192Q8TEP8 1941 aa17.51■□□□□ 0.39
LMX1B-203ENST00000526117 hCG_1818297A0A087WSY0 165 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 A0A0U1RQJ8 604 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 MACROD2A1Z1Q3 448 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 KPNA3O00505 521 aaPredicted RBP17.5■□□□□ 0.39
LMX1B-203ENST00000526117 MATN3O15232 486 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 AP1G1O43747 822 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 TGM2P21980 687 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 MARCKSL1P49006 195 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 SUOXP51687 545 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 NEK3P51956 506 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 METAP1P53582 386 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 GBE1Q04446 702 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 PPIDQ08752 370 aaKnown RBP17.5■□□□□ 0.39
LMX1B-203ENST00000526117 SLC10A7Q0GE19 358 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 SLC10A2Q12908 348 aaPredicted RBP17.5■□□□□ 0.39
LMX1B-203ENST00000526117 ZNF805Q5CZA5 627 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 ALG1LQ6GMV1 187 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 BZW1Q7L1Q6 419 aaKnown RBP17.5■□□□□ 0.39
LMX1B-203ENST00000526117 FAM124AQ86V42 546 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 BBS5Q8N3I7 341 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 TSEN2Q8NCE0 465 aaKnown RBP17.5■□□□□ 0.39
LMX1B-203ENST00000526117 CEP76Q8TAP6 659 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 GRIN3AQ8TCU5 1115 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 GANCQ8TET4 914 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 NSMCE1Q8WV22 266 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 ARRDC3Q96B67 414 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 RNF25Q96BH1 459 aaPredicted RBP17.5■□□□□ 0.39
LMX1B-203ENST00000526117 ZNF641Q96N77 438 aaPredicted RBP17.5■□□□□ 0.39
LMX1B-203ENST00000526117 ZNF830Q96NB3 372 aaPredicted RBP17.5■□□□□ 0.39
LMX1B-203ENST00000526117 CINPQ9BW66 212 aaPredicted RBP17.5■□□□□ 0.39
LMX1B-203ENST00000526117 ARRDC1-AS1Q9H2J1 176 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 ZDHHC6Q9H6R6 413 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 HAUS2Q9NVX0 235 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 SUSD2Q9UGT4 822 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 AMFRQ9UKV5 643 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.5■□□□□ 0.39
LMX1B-203ENST00000526117 ABCA7Q8IZY2 2146 aa17.5■□□□□ 0.39
LMX1B-203ENST00000526117 TSPAN11A1L157 253 aa17.49■□□□□ 0.39
LMX1B-203ENST00000526117 RNF103O00237 685 aa17.49■□□□□ 0.39
LMX1B-203ENST00000526117 KRIT1O00522 736 aa17.49■□□□□ 0.39
LMX1B-203ENST00000526117 LATO43561 262 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms