RNA–Protein interactions for RNA: ENST00000524393.5

RBBP4-215, Transcript of RB binding protein 4, chromatin remodeling factor, human

TSL 3

Gene RBBP4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBBP4-215	ENST00000524393	EEF2K	O00418	725 aa	Known RBP	12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	DDX3X	O00571	662 aa	Known RBP eCLIP	12.8	□□□□□ -0.36	4e-16	■■□□□ 12.5
RBBP4-215	ENST00000524393	NEMP1	O14524	444 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	RASA4	O43374	803 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	TNFSF14	O43557	240 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	TMCC1	O94876	653 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	CD160	O95971	181 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	PROS1	P07225	676 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	PRLR	P16471	622 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	ZNF135	P52742	658 aa	Predicted RBP	12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	RHOA	P61586	193 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	RPS21	P63220	83 aa	Known RBP	12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	OGDH	Q02218	1023 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	INO80D	Q53TQ3	878 aa	Predicted RBP	12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	ZNF805	Q5CZA5	627 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	PRAMEF14	Q5SWL7	426 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	E4F1	Q66K89	784 aa	Predicted RBP	12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	LEKR1	Q6ZMV7	388 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	PARS2	Q7L3T8	475 aa	Known RBP	12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	UMODL1-AS1	Q8N2C9	162 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	PNPLA1	Q8N8W4	532 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	OR6K2	Q8NGY2	324 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	FAM174A	Q8TBP5	190 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	SYN2	Q92777	582 aa	Predicted RBP	12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	KLK6	Q92876	244 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	FEM1C	Q96JP0	617 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	MYOC	Q99972	504 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	PCSK1N	Q9UHG2	260 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	KLK13	Q9UKR3	277 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	ACTL7A	Q9Y615	435 aa		12.8	□□□□□ -0.36
RBBP4-215	ENST00000524393	ARHGAP42	A6NI28	874 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	C16orf96	A6NNT2	1141 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	C1QTNF9B	B2RNN3	333 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	TSPAN6	O43657	245 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	AP1G1	O43747	822 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	SERPING1	P05155	500 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	C1QTNF9	P0C862	333 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	THEGL	P0DJG4	465 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	EPHA8	P29322	1005 aa	Predicted RBP	12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	NDST2	P52849	883 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	ZBED6	P86452	979 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	SGCG	Q13326	291 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	SERINC3	Q13530	473 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	ACAP1	Q15027	740 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	ZNF284	Q2VY69	593 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	MYLK3	Q32MK0	819 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	ZSCAN23	Q3MJ62	389 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	HS1BP3	Q53T59	392 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	PPP6R3	Q5H9R7	873 aa	Predicted RBP	12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	GATAD2A	Q86YP4	633 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	PSTK	Q8IV42	348 aa	Known RBP	12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	CPLX3	Q8WVH0	158 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	HMCES	Q96FZ2	354 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	SNRNP25	Q9BV90	132 aa	Known RBP	12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	CALN1	Q9BXU9	219 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	ISCU	Q9H1K1	167 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	GPATCH2L	Q9NWQ4	482 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	UBA2	Q9UBT2	640 aa	Predicted RBP	12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	LUC7L2	Q9Y383	392 aa	Known RBP	12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393	CHD5	Q8TDI0	1954 aa		12.79	□□□□□ -0.36
RBBP4-215	ENST00000524393		A6NNZ2	444 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	LDOC1	O95751	146 aa	Predicted RBP	12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	UGT2B4	P06133	528 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	ATXN1L	P0C7T5	689 aa	Known RBP	12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	XPA	P23025	273 aa	Predicted RBP	12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	MIP	P30301	263 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	RXRG	P48443	463 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	GRM3	Q14832	879 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	NFKBIB	Q15653	356 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	TMEM259	Q4ZIN3	620 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	CCDC157	Q569K6	752 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	CFAP58	Q5T655	872 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	SEL1L3	Q68CR1	1132 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	GDPD4	Q6W3E5	623 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	RFX8	Q6ZV50	586 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	SLCO6A1	Q86UG4	719 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	SPATS2	Q86XZ4	545 aa	Known RBP	12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	DNAAF5	Q86Y56	855 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	DCP2	Q8IU60	420 aa	Known RBP	12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	GALNT15	Q8N3T1	639 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	TMEM145	Q8NBT3	493 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	SAP25	Q8TEE9	199 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	KLHL32	Q96NJ5	620 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	SLC17A9	Q9BYT1	436 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	NOL6	Q9H6R4	1146 aa	Known RBP	12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	ZWILCH	Q9H900	591 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	FZD3	Q9NPG1	666 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	IFNK	Q9P0W0	207 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	CAPN11	Q9UMQ6	739 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	ZFR2	Q9UPR6	939 aa	Known RBP	12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	12.78	□□□□□ -0.36	3e-13	■■□□□ 11.8
RBBP4-215	ENST00000524393	FADS3	Q9Y5Q0	445 aa		12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	COL5A1	P20908	1838 aa	Predicted RBP	12.78	□□□□□ -0.36
RBBP4-215	ENST00000524393	FAM221B	A6H8Z2	402 aa		12.77	□□□□□ -0.37
RBBP4-215	ENST00000524393	RNF103	O00237	685 aa		12.77	□□□□□ -0.37
RBBP4-215	ENST00000524393	ENC1	O14682	589 aa		12.77	□□□□□ -0.37
RBBP4-215	ENST00000524393	LRCH4	O75427	683 aa		12.77	□□□□□ -0.37
RBBP4-215	ENST00000524393	CDK4	P11802	303 aa		12.77	□□□□□ -0.37
RBBP4-215	ENST00000524393	GK	P32189	559 aa		12.77	□□□□□ -0.37

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