RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 CCNYL1Q8N7R7 359 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 KCTD4Q8WVF5 259 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 C12orf43Q96C57 262 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 SGF29Q96ES7 293 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 KIF12Q96FN5 646 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 HSFY1Q96LI6 401 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 SLC25A23Q9BV35 468 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 BRD8Q9H0E9 1235 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 GBA3Q9H227 469 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 MRPL46Q9H2W6 279 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 C8orf4Q9NR00 106 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 DUS2Q9NX74 493 aaKnown RBP10.39□□□□□ -0.75
SPIDR-225ENST00000524141 CD300AQ9UGN4 299 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 TRHDEQ9UKU6 1024 aa10.39□□□□□ -0.75
SPIDR-225ENST00000524141 PRORSD1PA6NEY8 169 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 KCNK1O00180 336 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 PSMD12O00232 456 aaPredicted RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 PHGDHO43175 533 aaKnown RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 SRP72O76094 671 aaKnown RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 C7P10643 843 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 CYP2B6P20813 491 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 MYF6P23409 242 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 NME5P56597 212 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 DNAJB13P59910 316 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 OLIG2Q13516 323 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 LY6KQ17RY6 165 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 ZNF829Q3KNS6 432 aaPredicted RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 ERMP1Q7Z2K6 904 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 ERO1BQ86YB8 467 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 IFNLR1Q8IU57 520 aaPredicted RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 CENPLQ8N0S6 344 aaPredicted RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 GIPC3Q8TF64 312 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 THAP11Q96EK4 314 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 MOCOSQ96EN8 888 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 TRIM15Q9C019 465 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 A0A0G2JMZ2 1700 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 LRRC37A2A6NM11 1700 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 SCN1AP35498 2009 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 KANSL1LA0AUZ9 987 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 DYTNA2CJ06 578 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 EEF2KO00418 725 aaKnown RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 UBDO15205 165 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 AKAP10O43572 662 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 SNRPB2P08579 225 aaKnown RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 NELFEP18615 380 aaKnown RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 SAT1P21673 171 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 RAB10P61026 200 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 AMHR2Q16671 573 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 CERCAMQ5T4B2 595 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 HMBOX1Q6NT76 420 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 PTAR1Q7Z6K3 402 aaPredicted RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 ACVR1CQ8NER5 493 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 OR2T34Q8NGX1 318 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 OR2T3Q8NH03 318 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 GRIN3AQ8TCU5 1115 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 TRAPPC12Q8WVT3 735 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 COX4I2Q96KJ9 171 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 PGLYRP2Q96PD5 576 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 MPHOSPH6Q99547 160 aaKnown RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 SMARCAD1Q9H4L7 1026 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 EML4Q9HC35 981 aaKnown RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 ACSS2Q9NR19 701 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 CHRAC1Q9NRG0 131 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 GTSE1Q9NYZ3 720 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 TMEM181Q9P2C4 612 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 EBF1Q9UH73 591 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 ZNF112Q9UJU3 913 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 CROTQ9UKG9 612 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 WDR37Q9Y2I8 494 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 TDRKHQ9Y2W6 561 aaKnown RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 ZNF711Q9Y462 761 aa10.38□□□□□ -0.75
SPIDR-225ENST00000524141 ZNF638Q14966 1978 aaKnown RBP10.38□□□□□ -0.75
SPIDR-225ENST00000524141 TRIM64A6NGJ6 449 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 MRASO14807 208 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 DCLK1O15075 740 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 STMN1P16949 149 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 CDH15P55291 814 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 PRAMEP78395 509 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 PHEXP78562 749 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 PRKCQQ04759 706 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 CXCL9Q07325 125 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 CDH17Q12864 832 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 RALGDSQ12967 914 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 PDCD4Q53EL6 469 aaKnown RBP10.37□□□□□ -0.75
SPIDR-225ENST00000524141 AGKQ53H12 422 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 C6orf10Q5SRN2 563 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 CELF3Q5SZQ8 465 aaKnown RBP10.37□□□□□ -0.75
SPIDR-225ENST00000524141 TREML2Q5T2D2 321 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 NAPEPLDQ6IQ20 393 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 ELMSAN1Q6PJG2 1045 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 ZNF354CQ86Y25 554 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 COLGALT2Q8IYK4 626 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 ZNF786Q8N393 782 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 C7orf31Q8N865 590 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 GOLM1Q8NBJ4 401 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 OR6B3Q8NGW1 331 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 CCDC126Q96EE4 140 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 VAT1Q99536 393 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 DOK1Q99704 481 aa10.37□□□□□ -0.75
SPIDR-225ENST00000524141 APBA2Q99767 749 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms