RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 DUSP10Q9Y6W6 482 aa12.72□□□□□ -0.37
CCNC-216ENST00000523961 NYNRINQ9P2P1 1898 aaKnown RBP12.72□□□□□ -0.37
CCNC-216ENST00000523961 NUMA1Q14980 2115 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 FAM47DPA6NHR8 397 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 C3orf70A6NLC5 250 aaPredicted RBP12.71□□□□□ -0.37
CCNC-216ENST00000523961 PLK4O00444 970 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 KRIT1O00522 736 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 MFSD11O43934 449 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 MAFKO60675 156 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 GNSP15586 552 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 ZFXP17010 805 aaPredicted RBP12.71□□□□□ -0.37
CCNC-216ENST00000523961 ITGB7P26010 798 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 RENBPP51606 427 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 ADPRHP54922 357 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 GRM3Q14832 879 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 CCDC6Q16204 474 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 DUOXA1Q1HG43 343 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 AGBL4Q5VU57 503 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 KIAA0895LQ68EN5 471 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 NCEH1Q6PIU2 408 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 PRR23CQ6ZRP0 262 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 ERN2Q76MJ5 926 aaKnown RBP12.71□□□□□ -0.37
CCNC-216ENST00000523961 LRRC8AQ8IWT6 810 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 BBS5Q8N3I7 341 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 PQLC3Q8N755 202 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 C12orf50Q8NA57 414 aaPredicted RBP12.71□□□□□ -0.37
CCNC-216ENST00000523961 OR6K2Q8NGY2 324 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 KIAA1524Q8TCG1 905 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 ARRDC3Q96B67 414 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 RNF25Q96BH1 459 aaPredicted RBP12.71□□□□□ -0.37
CCNC-216ENST00000523961 OSBPL1AQ9BXW6 950 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 HDAC8Q9BY41 377 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 TMEM74BQ9NUR3 256 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 SEPT3Q9UH03 358 aa12.71□□□□□ -0.37
CCNC-216ENST00000523961 EVLQ9UI08 416 aaPredicted RBP12.71□□□□□ -0.37
CCNC-216ENST00000523961 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.71□□□□□ -0.37
CCNC-216ENST00000523961 ATXN2Q99700 1313 aaKnown RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 TBC1D3DA0A087WVF3 549 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 TBC1D3IA0A087WXS9 549 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 TBC1D3EA0A087X179 549 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 TBC1D3KA0A087X1G2 549 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 TBC1D3FA6NER0 549 aaPredicted RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 TBC1D3LB9A6J9 549 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 APOL1O14791 398 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 KHNYNO15037 678 aaKnown RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 PLRG1O43660 514 aaKnown RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 FSBPO95073 299 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 ZRANB2O95218 330 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCNC-216ENST00000523961 TBC1D3HP0C7X1 549 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 MX2P20592 715 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 MAOBP27338 520 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 GKP32189 559 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 HSPA9P38646 679 aaKnown RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 GARSP41250 739 aaKnown RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 CSNK1DP48730 415 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 CCR5P51681 352 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 NEK3P51956 506 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 LMNB2Q03252 620 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 NSUN2Q08J23 767 aaKnown RBP eCLIP12.7□□□□□ -0.38
CCNC-216ENST00000523961 GALNT2Q10471 571 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 ZNF235Q14590 738 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 LBRQ14739 615 aaKnown RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 SF3A2Q15428 464 aaKnown RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 ZNF805Q5CZA5 627 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 PIP5KL1Q5T9C9 394 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 SLC9A4Q6AI14 798 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 TBC1D3GQ6DHY5 549 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 TBC1D3CQ6IPX1 549 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 TIGD7Q6NT04 549 aaPredicted RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 MFSD7Q6UXD7 560 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 GDPD4Q6W3E5 623 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 RFX6Q8HWS3 928 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 KATNAL2Q8IYT4 538 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 RCOR2Q8IZ40 523 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 TBC1D3Q8IZP1 549 aaPredicted RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 SNX19Q92543 992 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 BIRC7Q96CA5 298 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 ZNF830Q96NB3 372 aaPredicted RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 PSKH2Q96QS6 385 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 NUSAP1Q9BXS6 441 aaKnown RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 CPEB1Q9BZB8 566 aaKnown RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 TSGA10Q9BZW7 698 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 SMOC1Q9H4F8 434 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 PREBQ9HCU5 417 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 EIF2B4Q9UI10 523 aaKnown RBP12.7□□□□□ -0.38
CCNC-216ENST00000523961 ADGRG1Q9Y653 693 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 RALGAPA1Q6GYQ0 2036 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 CEP192Q8TEP8 1941 aa12.7□□□□□ -0.38
CCNC-216ENST00000523961 A0A1B0GTW7 788 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 MACROD2A1Z1Q3 448 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 GRID2IPA4D2P6 1211 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 PRR5-ARHGAP8B1AHC4 643 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 RNF103O00237 685 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 PEX11BO96011 259 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 CFIP05156 583 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 UGT2B4P06133 528 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 IGHV4-34P06331 123 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 SERPINF2P08697 491 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 CCNCP24863 283 aa12.69□□□□□ -0.38
CCNC-216ENST00000523961 CD27P26842 260 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms