RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 C1QTNF2Q9BXJ5 285 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 CALN1Q9BXU9 219 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 GPR27Q9NS67 375 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 UCKL1Q9NWZ5 548 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 ADAMTS20P59510 1910 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 ACACAQ13085 2346 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 CACNA1GO43497 2377 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 LAMA5O15230 3695 aa17.08■□□□□ 0.33
SPIDR-221ENST00000523814 A0A087WV48 116 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 TCRBV5S1A1TA0A578 114 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 POM121BA6NF01 834 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 C16orf96A6NNT2 1141 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 A6NNZ2 444 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 TSPAN6O43657 245 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 RAMP2O60895 175 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 PIAS2O75928 621 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 POP4O95707 220 aaKnown RBP17.08■□□□□ 0.32
SPIDR-221ENST00000523814 GSRP00390 522 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 GIMD1P0DJR0 217 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 HOXB3P14651 431 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-221ENST00000523814 GPD1P21695 349 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 E2F1Q01094 437 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 UBXN1Q04323 297 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 C1QBPQ07021 282 aaKnown RBP17.08■□□□□ 0.32
SPIDR-221ENST00000523814 POLD3Q15054 466 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-221ENST00000523814 MYLK3Q32MK0 819 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 ZNF805Q5CZA5 627 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 MON1BQ7L1V2 547 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 PARS2Q7L3T8 475 aaKnown RBP17.08■□□□□ 0.32
SPIDR-221ENST00000523814 APTXQ7Z2E3 356 aaKnown RBP17.08■□□□□ 0.32
SPIDR-221ENST00000523814 SLFN11Q7Z7L1 901 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 HNRNPLLQ8WVV9 542 aaKnown RBP17.08■□□□□ 0.32
SPIDR-221ENST00000523814 ASB12Q8WXK4 309 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 PCMTD1Q96MG8 357 aaPredicted RBP17.08■□□□□ 0.32
SPIDR-221ENST00000523814 AGPAT1Q99943 283 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 SELENOOQ9BVL4 669 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 TM6SF2Q9BZW4 377 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 NRSN2Q9GZP1 204 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 ZDHHC6Q9H6R6 413 aa17.08■□□□□ 0.32
SPIDR-221ENST00000523814 ZSCAN5CA6NGD5 496 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-221ENST00000523814 RAD51BO15315 384 aa17.07■□□□□ 0.32
SPIDR-221ENST00000523814 ZNF143P52747 638 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-221ENST00000523814 SNRPD1P62314 119 aaKnown RBP17.07■□□□□ 0.32
SPIDR-221ENST00000523814 SGCGQ13326 291 aa17.07■□□□□ 0.32
SPIDR-221ENST00000523814 MAPK8IP2Q13387 824 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-221ENST00000523814 RTP5Q14D33 572 aa17.07■□□□□ 0.32
SPIDR-221ENST00000523814 KYAT3Q6YP21 454 aaKnown RBP17.07■□□□□ 0.32
SPIDR-221ENST00000523814 PDZD3Q86UT5 571 aa17.07■□□□□ 0.32
SPIDR-221ENST00000523814 RYBPQ8N488 228 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-221ENST00000523814 OR2AP1Q8NGE2 309 aa17.07■□□□□ 0.32
SPIDR-221ENST00000523814 NXPE2Q96DL1 559 aa17.07■□□□□ 0.32
SPIDR-221ENST00000523814 GBP4Q96PP9 640 aa17.07■□□□□ 0.32
SPIDR-221ENST00000523814 KLF6Q99612 283 aaPredicted RBP17.07■□□□□ 0.32
SPIDR-221ENST00000523814 OSBPL1AQ9BXW6 950 aa17.07■□□□□ 0.32
SPIDR-221ENST00000523814 HSD3B7Q9H2F3 369 aa17.07■□□□□ 0.32
SPIDR-221ENST00000523814 NOL6Q9H6R4 1146 aaKnown RBP17.07■□□□□ 0.32
SPIDR-221ENST00000523814 URB1O60287 2271 aaKnown RBP17.07■□□□□ 0.32
SPIDR-221ENST00000523814 CELSR3Q9NYQ7 3312 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 SPTY2D1-AS1A0A0U1RR47 76 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 NEMP2A6NFY4 417 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 IGLON5A6NGN9 336 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 KRIT1O00522 736 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 CKMT1AP12532 417 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 CDK11BP21127 795 aaKnown RBP17.06■□□□□ 0.32
SPIDR-221ENST00000523814 GKP32189 559 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 ANP32AP39687 249 aaKnown RBP17.06■□□□□ 0.32
SPIDR-221ENST00000523814 INSM1Q01101 510 aaPredicted RBP17.06■□□□□ 0.32
SPIDR-221ENST00000523814 FZD2Q14332 565 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 NCAPHQ15003 741 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 STX1AQ16623 288 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 HS1BP3Q53T59 392 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 PPP1R15BQ5SWA1 713 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 PYROXD2Q8N2H3 581 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 RTL3Q8N8U3 475 aaKnown RBP17.06■□□□□ 0.32
SPIDR-221ENST00000523814 DCBLD1Q8N8Z6 715 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 OR6K2Q8NGY2 324 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 CASKIN2Q8WXE0 1202 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 DNAJC28Q9NX36 388 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 NLGN3Q9NZ94 848 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 CLCA2Q9UQC9 943 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 MFHAS1Q9Y4C4 1052 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 CHD5Q8TDI0 1954 aa17.06■□□□□ 0.32
SPIDR-221ENST00000523814 ANKRD62A6NC57 917 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 FPGTO14772 594 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 AREL1O15033 823 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 SCAMP1O15126 338 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 BUB1O43683 1085 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 CSF2P04141 144 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 EPHB2P29323 1055 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 ABL2P42684 1182 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 RABIFP47224 123 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 AIF1P55008 147 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 YBEYP58557 167 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-221ENST00000523814 HNRNPKP61978 463 aaKnown RBP eCLIP17.05■□□□□ 0.32
SPIDR-221ENST00000523814 RPL7AP62424 266 aaKnown RBP17.05■□□□□ 0.32
SPIDR-221ENST00000523814 INO80DQ53TQ3 878 aaPredicted RBP17.05■□□□□ 0.32
SPIDR-221ENST00000523814 ZNF542PQ5EBM4 170 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 EFHC2Q5JST6 749 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 DNAJC24Q6P3W2 148 aa17.05■□□□□ 0.32
SPIDR-221ENST00000523814 GDPD4Q6W3E5 623 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms