RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 CAPN12Q6ZSI9 719 aa22.45■■□□□ 1.19
PTP4A3-204ENST00000521578 ARHGEF18Q6ZSZ5 1173 aa22.45■■□□□ 1.19
PTP4A3-204ENST00000521578 ETFBKMTQ8IXQ9 262 aa22.45■■□□□ 1.19
PTP4A3-204ENST00000521578 MCUQ8NE86 351 aa22.45■■□□□ 1.19
PTP4A3-204ENST00000521578 OLFM3Q96PB7 478 aa22.45■■□□□ 1.19
PTP4A3-204ENST00000521578 C8orf33Q9H7E9 229 aaPredicted RBP22.45■■□□□ 1.19
PTP4A3-204ENST00000521578 NKIRAS1Q9NYS0 192 aa22.45■■□□□ 1.19
PTP4A3-204ENST00000521578 DTLQ9NZJ0 730 aa22.45■■□□□ 1.19
PTP4A3-204ENST00000521578 PRPF4O43172 522 aaKnown RBP eCLIP22.45■■□□□ 1.181e-6■■■□□ 16.3
PTP4A3-204ENST00000521578 CLDN11O75508 207 aa22.45■■□□□ 1.18
PTP4A3-204ENST00000521578 SPAG6O75602 509 aa22.45■■□□□ 1.18
PTP4A3-204ENST00000521578 HOXC13P31276 330 aa22.45■■□□□ 1.18
PTP4A3-204ENST00000521578 ELK3P41970 407 aa22.45■■□□□ 1.18
PTP4A3-204ENST00000521578 TXNDC11Q6PKC3 985 aa22.45■■□□□ 1.18
PTP4A3-204ENST00000521578 ADGRD1Q6QNK2 874 aa22.45■■□□□ 1.18
PTP4A3-204ENST00000521578 FBF1Q8TES7 1133 aa22.45■■□□□ 1.18
PTP4A3-204ENST00000521578 SGSM3Q96HU1 749 aa22.45■■□□□ 1.18
PTP4A3-204ENST00000521578 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 FAM47DPA6NHR8 397 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 KIAA0754O94854 1291 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 RHOQP17081 205 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 MESP2Q0VG99 397 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 ZNF177Q13360 481 aaPredicted RBP22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 LRRC14Q15048 493 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 FSCBQ5H9T9 825 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 RNF43Q68DV7 783 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 ASTLQ6HA08 431 aaPredicted RBP22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 TPRG1Q6ZUI0 275 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 CHST9Q7L1S5 443 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 RALGPS2Q86X27 583 aaPredicted RBP22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 IGDCC3Q8IVU1 814 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 CCDC117Q8IWD4 279 aaPredicted RBP22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 ANKRD42Q8N9B4 389 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 DYDC1Q8WWB3 177 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 TRABDQ9H4I3 376 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 CATSPERBQ9H7T0 1116 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 ETNK1Q9HBU6 452 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 SSU72Q9NP77 194 aaKnown RBP22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 ARHGEF4Q9NR80 690 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 NDFIP2Q9NV92 336 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 DEC1Q9P2X7 70 aa22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 SMG5Q9UPR3 1016 aaKnown RBP22.44■■□□□ 1.18
PTP4A3-204ENST00000521578 ERCC2P18074 760 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 CD72P21854 359 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 OR1E1P30953 314 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 NUMBP49757 651 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 KDSRQ06136 332 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 DPYSQ14117 519 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 MLF2Q15773 248 aaPredicted RBP22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 CCDC110Q8TBZ0 833 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 MGARPQ8TDB4 240 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 NSRP1Q9H0G5 558 aaKnown RBP22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 FBRSL1Q9HCM7 1045 aaKnown RBP22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 ARHGEF3Q9NR81 526 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 WNT16Q9UBV4 365 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 ZNF212Q9UDV6 495 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 FGF10O15520 208 aaPredicted RBP22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 MAP3K6O95382 1288 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 TPSB2P20231 275 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 HLA-FP30511 346 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 DGKGP49619 791 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 ZXDAP98168 799 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 TPSAB1Q15661 275 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 CXorf57Q6NSI4 855 aaKnown RBP22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 RTL3Q8N8U3 475 aaKnown RBP22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 OR52K2Q8NGK3 314 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 FIBINQ8TAL6 211 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 DENND1AQ8TEH3 1009 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 CABS1Q96KC9 395 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 CYTH2Q99418 400 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 ABCB8Q9NUT2 735 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 TMEM248Q9NWD8 314 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 FBXO10Q9UK96 956 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 CHMP2BQ9UQN3 213 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 MFHAS1Q9Y4C4 1052 aa22.43■■□□□ 1.18
PTP4A3-204ENST00000521578 KRBA1A5PL33 1030 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 ANKRD65E5RJM6 399 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 VIMP08670 466 aaKnown RBP22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 GLULP15104 373 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 KRT15P19012 456 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 CD70P32970 193 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 GALK1P51570 392 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 IFT88Q13099 833 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 PON2Q15165 354 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 GRAMD4Q6IC98 578 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 CAND1Q86VP6 1230 aaKnown RBP22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 SIX5Q8N196 739 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 OTUD6BQ8N6M0 293 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 TFB1MQ8WVM0 346 aaKnown RBP22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 LRRC39Q96DD0 335 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 PAFAH2Q99487 392 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 P2RY13Q9BPV8 354 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 SLC2A11Q9BYW1 496 aa22.42■■□□□ 1.18
PTP4A3-204ENST00000521578 CISD3P0C7P0 127 aa22.41■■□□□ 1.18
PTP4A3-204ENST00000521578 LMAN2Q12907 356 aa22.41■■□□□ 1.18
PTP4A3-204ENST00000521578 ITIH4Q14624 930 aa22.41■■□□□ 1.18
PTP4A3-204ENST00000521578 PAFAH1B3Q15102 231 aaKnown RBP22.41■■□□□ 1.18
PTP4A3-204ENST00000521578 CCDC197Q8NCU1 140 aa22.41■■□□□ 1.18
PTP4A3-204ENST00000521578 DCAKDQ8WVC6 231 aa22.41■■□□□ 1.18
PTP4A3-204ENST00000521578 MAGEB18Q96M61 343 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms