RNA–Protein interactions for RNA: ENST00000521332.5

PTK2-231, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-231	ENST00000521332	SLC26A9	Q7LBE3	791 aa		18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	WDR36	Q8NI36	951 aa	Known RBP	18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	SNRNP27	Q8WVK2	155 aa	Known RBP	18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	BTN2A2	Q8WVV5	523 aa		18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	FAM81B	Q96LP2	452 aa		18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	TM6SF2	Q9BZW4	377 aa		18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	PLCB1	Q9NQ66	1216 aa		18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	18.69	■□□□□ 0.58	4e-8	■■■■□ 23.4
PTK2-231	ENST00000521332	SPAST	Q9UBP0	616 aa		18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	PCDHGC3	Q9UN70	934 aa		18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	FCF1	Q9Y324	198 aa	Known RBP	18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	PAXBP1	Q9Y5B6	917 aa		18.69	■□□□□ 0.58
PTK2-231	ENST00000521332	CASC3	O15234	703 aa	Known RBP	18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	SPINT1	O43278	529 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	LZTS3	O60299	673 aa	Predicted RBP	18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	TCEA3	O75764	348 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	SLC9A1	P19634	815 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	CXCR3	P49682	368 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	SERPINH1	P50454	418 aa	Known RBP	18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	ADK	P55263	362 aa	Known RBP	18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	PTK2	Q05397	1052 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	EIF2B5	Q13144	721 aa	Known RBP	18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	SPIDR	Q14159	915 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	PTPN20	Q4JDL3	420 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	ZNF683	Q8IZ20	524 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	PCDH20	Q8N6Y1	951 aa	Known RBP	18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	PRR11	Q96HE9	360 aa	Predicted RBP	18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	TIGD1	Q96MW7	591 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	NPY6R	Q99463	290 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	CCDC3	Q9BQI4	270 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	FAM117A	Q9C073	453 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	PDCL3	Q9H2J4	239 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	TCEAL2	Q9H3H9	227 aa	Predicted RBP	18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	RRN3	Q9NYV6	651 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	GGT7	Q9UJ14	662 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	ITM2B	Q9Y287	266 aa		18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	HEMK1	Q9Y5R4	338 aa	Predicted RBP	18.68	■□□□□ 0.58
PTK2-231	ENST00000521332	KIF26B	Q2KJY2	2108 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	CCDC187	A0A096LP49	1063 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	DRGX	A6NNA5	263 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	CDRT15L2	A8MXV6	281 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332		I6L893	689 aa	Predicted RBP	18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	RIOK3	O14730	519 aa	Known RBP	18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	TPP1	O14773	563 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	ARHGAP6	O43182	974 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	AP1G1	O43747	822 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	ZNF821	O75541	412 aa	Predicted RBP	18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	WISP1	O95388	367 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	ANXA6	P08133	673 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	GK	P32189	559 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	MARS	P56192	900 aa	Known RBP	18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	NFATC3	Q12968	1075 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	PAK1	Q13153	545 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	CLN3	Q13286	438 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	PTK2B	Q14289	1009 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	FAXC	Q5TGI0	409 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	JAML	Q86YT9	394 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	SLC35F3	Q8IY50	421 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	DRC7	Q8IY82	874 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	PHACTR4	Q8IZ21	702 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	OR6K2	Q8NGY2	324 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	NAT6	Q93015	286 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	LENG8	Q96PV6	779 aa	Predicted RBP	18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	CCNL2	Q96S94	520 aa	Predicted RBP	18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	TBCB	Q99426	244 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	KLF6	Q99612	283 aa	Predicted RBP	18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	SLC13A1	Q9BZW2	595 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	CEP44	Q9C0F1	390 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	HECA	Q9UBI9	543 aa	Predicted RBP	18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	APEX2	Q9UBZ4	518 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	DOLK	Q9UPQ8	538 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	ACTL7A	Q9Y615	435 aa		18.67	■□□□□ 0.58
PTK2-231	ENST00000521332	ILVBL	A1L0T0	632 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	TSPAN6	O43657	245 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	GCAT	O75600	419 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	FGFR1OP	O95684	399 aa	Known RBP	18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	F9	P00740	461 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	BMP6	P22004	513 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	ABL2	P42684	1182 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	SKOR1	P84550	965 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	SLC20A2	Q08357	652 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	TCEA2	Q15560	299 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	ESRP1	Q6NXG1	681 aa	Known RBP	18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	VPS36	Q86VN1	386 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	ZSCAN30	Q86W11	494 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	ZNF397	Q8NF99	534 aa	Predicted RBP	18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	WDR48	Q8TAF3	677 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	BOC	Q9BWV1	1114 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	C1QTNF2	Q9BXJ5	285 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	TRIM4	Q9C037	500 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	EPB41L5	Q9HCM4	733 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	GULP1	Q9UBP9	304 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	PADI4	Q9UM07	663 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	SSUH2	Q9Y2M2	353 aa		18.66	■□□□□ 0.58
PTK2-231	ENST00000521332	RP1	P56715	2156 aa		18.65	■□□□□ 0.58
PTK2-231	ENST00000521332	C16orf96	A6NNT2	1141 aa		18.65	■□□□□ 0.58
PTK2-231	ENST00000521332	KRIT1	O00522	736 aa		18.65	■□□□□ 0.58
PTK2-231	ENST00000521332	PFN3	P60673	137 aa		18.65	■□□□□ 0.58
PTK2-231	ENST00000521332	ARF5	P84085	180 aa		18.65	■□□□□ 0.58
PTK2-231	ENST00000521332	GNA12	Q03113	381 aa		18.65	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms