RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 C14orf80Q86SX3 495 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 RTP4Q96DX8 246 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 SCLYQ96I15 445 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 ZNF778Q96MU6 729 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 FCRL3Q96P31 734 aaPredicted RBP10.28□□□□□ -0.76
MCF2-209ENST00000520602 FTHL17Q9BXU8 183 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 DENND2DQ9H6A0 471 aaPredicted RBP10.28□□□□□ -0.76
MCF2-209ENST00000520602 NMUR1Q9HB89 426 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 FAM50BQ9Y247 325 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 ATP11BQ9Y2G3 1177 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 SLC30A1Q9Y6M5 507 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 ZNF487B1APH4 448 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 GMNNO75496 209 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 SRP72O76094 671 aaKnown RBP10.28□□□□□ -0.76
MCF2-209ENST00000520602 TGDSO95455 350 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 SLC10A3P09131 477 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 FAM163BP0C2L3 166 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 TYMPP19971 482 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 RAB10P61026 200 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 PRKAA1Q13131 559 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 TBCCQ15814 346 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 WASHC2DQ5SRD0 308 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 RINLQ6ZS11 566 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 RTL3Q8N8U3 475 aaKnown RBP10.28□□□□□ -0.76
MCF2-209ENST00000520602 NXNL1Q96CM4 212 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 ASIC4Q96FT7 647 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 GBP5Q96PP8 586 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 POMKQ9H5K3 350 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 ZNF623O75123 536 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 CHEK2O96017 543 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 HLA-DQB2P05538 268 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 CRABP2P29373 138 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 GALNT2Q10471 571 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 TSTA3Q13630 321 aaPredicted RBP10.28□□□□□ -0.76
MCF2-209ENST00000520602 TRIP10Q15642 601 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 SNX30Q5VWJ9 437 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 USP13Q92995 863 aaPredicted RBP10.28□□□□□ -0.76
MCF2-209ENST00000520602 DEFB118Q96PH6 123 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 ALG9Q9H6U8 611 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 WDR6Q9NNW5 1121 aaKnown RBP10.28□□□□□ -0.76
MCF2-209ENST00000520602 SCUBE2Q9NQ36 999 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.28□□□□□ -0.76
MCF2-209ENST00000520602 PRKAG3Q9UGI9 489 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 SCOCQ9UIL1 159 aa10.28□□□□□ -0.76
MCF2-209ENST00000520602 C2orf81A6NN90 581 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 J3KR12 359 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 EOMESO95936 686 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 ALDOAP04075 364 aaKnown RBP10.27□□□□□ -0.76
MCF2-209ENST00000520602 INHAP05111 366 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 SELPP16109 830 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 MPSTP25325 297 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 GCKP35557 465 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 VHLP40337 213 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 HCAR3P49019 387 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 RPL14P50914 215 aaKnown RBP10.27□□□□□ -0.76
MCF2-209ENST00000520602 SLC10A7Q0GE19 358 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 SNX32Q86XE0 403 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 RBM15BQ8NDT2 890 aaKnown RBP10.27□□□□□ -0.76
MCF2-209ENST00000520602 OR52K2Q8NGK3 314 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 MOCOSQ96EN8 888 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 BTN2A3PQ96KV6 586 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 GCNAQ96QF7 691 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 EGFL8Q99944 293 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 MRPL1Q9BYD6 325 aaKnown RBP10.27□□□□□ -0.76
MCF2-209ENST00000520602 COG4Q9H9E3 785 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 TAS2R1Q9NYW7 299 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 SLC2A6Q9UGQ3 507 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 AFF4Q9UHB7 1163 aaKnown RBP10.27□□□□□ -0.76
MCF2-209ENST00000520602 HS3ST4Q9Y661 456 aa10.27□□□□□ -0.76
MCF2-209ENST00000520602 TBL3Q12788 808 aaKnown RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 PEX6Q13608 980 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 FUT10Q6P4F1 479 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 DDI1Q8WTU0 396 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 HAPLN3Q96S86 360 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 TTPALQ9BTX7 342 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 GATA5Q9BWX5 397 aaPredicted RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 CADM1Q9BY67 442 aaKnown RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 OSBPL2Q9H1P3 480 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 MOCS1Q9NZB8 636 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 UBA2Q9UBT2 640 aaPredicted RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 A8MX80 341 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 CLGNO14967 610 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 CNTN5O94779 1100 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 SERPINA6P08185 405 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 RBP1P09455 135 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 THRAP10827 490 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 XPAP23025 273 aaPredicted RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 TUFMP49411 452 aaKnown RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 MLLT6P55198 1093 aaPredicted RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 PLEKHG4Q58EX7 1191 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 TEDDM1Q5T9Z0 273 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 PLD6Q8N2A8 252 aaKnown RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 ZNF781Q8N8C0 355 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 PRR11Q96HE9 360 aaPredicted RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 OLFM3Q96PB7 478 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 DDX50Q9BQ39 737 aaKnown RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 MRPL46Q9H2W6 279 aaKnown RBP10.27□□□□□ -0.77
MCF2-209ENST00000520602 DNMT3LQ9UJW3 386 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 PLA2G4CQ9UP65 541 aa10.27□□□□□ -0.77
MCF2-209ENST00000520602 ANKRD6Q9Y2G4 727 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms