RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 NTAN1Q96AB6 310 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 C1QTNF2Q9BXJ5 285 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 TM6SF2Q9BZW4 377 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 HSD3B7Q9H2F3 369 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 NOL6Q9H6R4 1146 aaKnown RBP12.66□□□□□ -0.38
CSMD1-205ENST00000519623 SCUBE2Q9NQ36 999 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 GPR27Q9NS67 375 aa12.66□□□□□ -0.38
CSMD1-205ENST00000519623 C16orf96A6NNT2 1141 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 KDELR3O43731 214 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 PIAS2O75928 621 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 POP4O95707 220 aaKnown RBP12.65□□□□□ -0.38
CSMD1-205ENST00000519623 CALB1P05937 261 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 GPD1P21695 349 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 HNF1BP35680 557 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 UBXN1Q04323 297 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
CSMD1-205ENST00000519623 NCAPHQ15003 741 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 POLD3Q15054 466 aaPredicted RBP12.65□□□□□ -0.38
CSMD1-205ENST00000519623 MYLK3Q32MK0 819 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 ZNF805Q5CZA5 627 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 HES3Q5TGS1 186 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 KIAA1161Q6NSJ0 714 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 LEKR1Q6ZMV7 388 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 MON1BQ7L1V2 547 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 SLFN11Q7Z7L1 901 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 DCP2Q8IU60 420 aaKnown RBP12.65□□□□□ -0.38
CSMD1-205ENST00000519623 PYROXD2Q8N2H3 581 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 C3orf20Q8ND61 904 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 NEK11Q8NG66 645 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 OR6K2Q8NGY2 324 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 OR4C6Q8NH72 309 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 TBC1D31Q96DN5 1066 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 IFT43Q96FT9 208 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 LRIG1Q96JA1 1093 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 LENG8Q96PV6 779 aaPredicted RBP12.65□□□□□ -0.38
CSMD1-205ENST00000519623 ERGIC2Q96RQ1 377 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 KLF6Q99612 283 aaPredicted RBP12.65□□□□□ -0.38
CSMD1-205ENST00000519623 AGPAT1Q99943 283 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 CALN1Q9BXU9 219 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 ZDHHC6Q9H6R6 413 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 ANO10Q9NW15 660 aa12.65□□□□□ -0.38
CSMD1-205ENST00000519623 FASNP49327 2511 aaKnown RBP12.64□□□□□ -0.39
CSMD1-205ENST00000519623 A0A087WV48 116 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 IGLON5A6NGN9 336 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 A6NNZ2 444 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 SPINT1O43278 529 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 TSPAN6O43657 245 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 RAMP2O60895 175 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 GSRP00390 522 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 ABL2P42684 1182 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 ZNF143P52747 638 aaPredicted RBP12.64□□□□□ -0.39
CSMD1-205ENST00000519623 GEMIN4P57678 1058 aaKnown RBP12.64□□□□□ -0.39
CSMD1-205ENST00000519623 SNRPD1P62314 119 aaKnown RBP12.64□□□□□ -0.39
CSMD1-205ENST00000519623 RPL7AP62424 266 aaKnown RBP12.64□□□□□ -0.39
CSMD1-205ENST00000519623 INSM1Q01101 510 aaPredicted RBP12.64□□□□□ -0.39
CSMD1-205ENST00000519623 MYL5Q02045 173 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 C1QBPQ07021 282 aaKnown RBP12.64□□□□□ -0.39
CSMD1-205ENST00000519623 FZD2Q14332 565 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 RTP5Q14D33 572 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 ZNF542PQ5EBM4 170 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 PPP1R15BQ5SWA1 713 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 SASS6Q6UVJ0 657 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 PDZD3Q86UT5 571 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 OR2AP1Q8NGE2 309 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 ASB12Q8WXK4 309 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 BAP1Q92560 729 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 RAB7BQ96AH8 199 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 PCMTD1Q96MG8 357 aaPredicted RBP12.64□□□□□ -0.39
CSMD1-205ENST00000519623 SELENOOQ9BVL4 669 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 NRSN2Q9GZP1 204 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 KLC2Q9H0B6 622 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 GGT7Q9UJ14 662 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 HPCAL4Q9UM19 191 aa12.64□□□□□ -0.39
CSMD1-205ENST00000519623 LY6G6EA0A0G2JKS1 128 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 SPTY2D1-AS1A0A0U1RR47 76 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 KRIT1O00522 736 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 AREL1O15033 823 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 SCAMP1O15126 338 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 FFAR2O15552 330 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 CCP110O43303 1012 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 CKMT1AP12532 417 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 CDK11BP21127 795 aaKnown RBP12.63□□□□□ -0.39
CSMD1-205ENST00000519623 E2F1Q01094 437 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 SGCGQ13326 291 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 TPRG1LQ5T0D9 272 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 ATXN7L2Q5T6C5 722 aaPredicted RBP12.63□□□□□ -0.39
CSMD1-205ENST00000519623 ACAD10Q6JQN1 1059 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 KYAT3Q6YP21 454 aaKnown RBP12.63□□□□□ -0.39
CSMD1-205ENST00000519623 IRF2BP2Q7Z5L9 587 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 ZSCAN30Q86W11 494 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 RYBPQ8N488 228 aaPredicted RBP12.63□□□□□ -0.39
CSMD1-205ENST00000519623 RTL3Q8N8U3 475 aaKnown RBP12.63□□□□□ -0.39
CSMD1-205ENST00000519623 DCBLD1Q8N8Z6 715 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 ANKRD20A12PQ8NF67 263 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 KLHL32Q96NJ5 620 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 DNAJC28Q9NX36 388 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 KLF15Q9UIH9 416 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 FZD10Q9ULW2 581 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 U3KQA8 63 aa12.63□□□□□ -0.39
CSMD1-205ENST00000519623 BAHCC1Q9P281 2608 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms