RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 ZNF189O75820 626 aaPredicted RBP8.1□□□□□ -1.11
CLK4-203ENST00000519583 MLNP12872 115 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 KRT4P19013 534 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 NFKB1P19838 968 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 KPNA1P52294 538 aaPredicted RBP8.1□□□□□ -1.11
CLK4-203ENST00000519583 MLLT6P55198 1093 aaPredicted RBP8.1□□□□□ -1.11
CLK4-203ENST00000519583 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
CLK4-203ENST00000519583 SF3A3Q12874 501 aaKnown RBP eCLIP8.1□□□□□ -1.112e-6■■■□□ 17.9
CLK4-203ENST00000519583 TEX44Q53QW1 395 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 ATPAF2Q8N5M1 289 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLK4-203ENST00000519583 GSDMBQ8TAX9 411 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 DNASE1L2Q92874 299 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 WBP2Q969T9 261 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 KLF6Q99612 283 aaPredicted RBP8.1□□□□□ -1.11
CLK4-203ENST00000519583 PAIP2Q9BPZ3 127 aaKnown RBP8.1□□□□□ -1.11
CLK4-203ENST00000519583 SLC39A8Q9C0K1 460 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 GBA3Q9H227 469 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 LINC00597Q9H2U6 94 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 MFSD1Q9H3U5 465 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 OLA1Q9NTK5 396 aaKnown RBP8.1□□□□□ -1.11
CLK4-203ENST00000519583 GTSE1Q9NYZ3 720 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 VANGL2Q9ULK5 521 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 KRBA1A5PL33 1030 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 SDR42E2A6NKP2 422 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 GOLGA8RI6L899 631 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 UGT1A9O60656 530 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 ARSAP15289 507 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 TCF3P15923 654 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 PRKCHP24723 683 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 HTR7P34969 479 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 COG7P83436 770 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 PDGFRLQ15198 375 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 MLF2Q15773 248 aaPredicted RBP8.1□□□□□ -1.11
CLK4-203ENST00000519583 ZNF276Q8N554 614 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 OSCP1Q8WVF1 389 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 FAM83CQ9BQN1 747 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 MLPHQ9BV36 600 aaPredicted RBP8.1□□□□□ -1.11
CLK4-203ENST00000519583 UGT1A7Q9HAW7 530 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 UGT1A10Q9HAW8 530 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 UGT1A8Q9HAW9 530 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 SYBUQ9NX95 663 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 TRHDEQ9UKU6 1024 aa8.1□□□□□ -1.11
CLK4-203ENST00000519583 F5P12259 2224 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 ARHGAP42A6NI28 874 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 TCP11X1B4DZS4 312 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 ARNTLO00327 626 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 TRDMT1O14717 391 aaKnown RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 PRPF4O43172 522 aaKnown RBP eCLIP8.09□□□□□ -1.11
CLK4-203ENST00000519583 AP2A1O95782 977 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 PDGFBP01127 241 aaPredicted RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 GSTA2P09210 222 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 SLC2A3P11169 496 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 CA4P22748 312 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 RPA3P35244 121 aaPredicted RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 MS4A13Q5J8X5 152 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 ITPRIPL1Q6GPH6 555 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 TPRG1Q6ZUI0 275 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 SLC26A11Q86WA9 606 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 LRRC6Q86X45 466 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 UNC5BQ8IZJ1 945 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 RTL3Q8N8U3 475 aaKnown RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 FLCNQ8NFG4 579 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 OR52K1Q8NGK4 314 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 CKAP2Q8WWK9 683 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 PBXIP1Q96AQ6 731 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 TEKT5Q96M29 485 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 HPS4Q9NQG7 708 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 LSM7Q9UK45 103 aaKnown RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 SMG5Q9UPR3 1016 aaKnown RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 IQANK1A0A1B0GTG1 560 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 E2F8A0AVK6 867 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 SLC9A3R1O14745 358 aaPredicted RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 TYROBPO43914 113 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 SOX9P48436 509 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 NRG1Q02297 640 aaPredicted RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 RUNX3Q13761 415 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 TRIP4Q15650 581 aaPredicted RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 SMAD1Q15797 465 aaKnown RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 TFAP2DQ7Z6R9 452 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 LZTR1Q8N653 840 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 CNTD1Q8N815 330 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 DENND1AQ8TEH3 1009 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 SGSM3Q96HU1 749 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 VAT1Q99536 393 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 APOL2Q9BQE5 337 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 UBP1Q9NZI7 540 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 PIAS3Q9Y6X2 628 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 HELZP42694 1942 aaKnown RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 ANKRD65E5RJM6 399 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 MT-ND3P03897 115 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 CD72P21854 359 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 SLC1A5Q15758 541 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 ZKSCAN8Q15776 578 aaPredicted RBP8.09□□□□□ -1.11
CLK4-203ENST00000519583 EML3Q32P44 896 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 ITPRIPL2Q3MIP1 535 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 TMEM31Q5JXX7 168 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 RAP1GAP2Q684P5 730 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 STEAP4Q687X5 459 aa8.09□□□□□ -1.11
CLK4-203ENST00000519583 KCTD11Q693B1 232 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms