RNA–Protein interactions for RNA: ENST00000518140.5

SLIT3-204, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 2,090 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-204ENST00000518140 EPHA5P54756 1037 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 SMC6Q96SB8 1091 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 MUC3BQ9H195 1237 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 CLEC4EQ9ULY5 219 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 SOX13Q9UN79 622 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 SH3BP1Q9Y3L3 701 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 IQANK1A0A1B0GTG1 560 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 FAM237BA0A1B0GVD1 139 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 TRIM49D1C9J1S8 452 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 RPA3P35244 121 aaPredicted RBP23.68■■□□□ 1.38
SLIT3-204ENST00000518140 RGRP47804 291 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 ZNF235Q14590 738 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 ICE2Q659A1 982 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 SH2D5Q6ZV89 423 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 SUGP1Q8IWZ8 645 aaKnown RBP23.68■■□□□ 1.38
SLIT3-204ENST00000518140 ZNF180Q9UJW8 692 aa23.68■■□□□ 1.38
SLIT3-204ENST00000518140 TYROBPO43914 113 aa23.67■■□□□ 1.38
SLIT3-204ENST00000518140 USP1O94782 785 aa23.67■■□□□ 1.38
SLIT3-204ENST00000518140 FSBPO95073 299 aa23.67■■□□□ 1.38
SLIT3-204ENST00000518140 MT-ND3P03897 115 aa23.67■■□□□ 1.38
SLIT3-204ENST00000518140 TTC39BQ5VTQ0 682 aaPredicted RBP23.67■■□□□ 1.38
SLIT3-204ENST00000518140 LINGO4Q6UY18 593 aa23.67■■□□□ 1.38
SLIT3-204ENST00000518140 TPGS1Q6ZTW0 290 aa23.67■■□□□ 1.38
SLIT3-204ENST00000518140 SERBP1Q8NC51 408 aaKnown RBP eCLIP23.67■■□□□ 1.38
SLIT3-204ENST00000518140 HJURPQ8NCD3 748 aaPredicted RBP23.67■■□□□ 1.38
SLIT3-204ENST00000518140 GDAP1Q8TB36 358 aa23.67■■□□□ 1.38
SLIT3-204ENST00000518140 CERS2Q96G23 380 aa23.67■■□□□ 1.38
SLIT3-204ENST00000518140 ZNF599Q96NL3 588 aa23.67■■□□□ 1.38
SLIT3-204ENST00000518140 KIFC1Q9BW19 673 aa23.67■■□□□ 1.38
SLIT3-204ENST00000518140 C12orf65Q9H3J6 166 aaKnown RBP23.67■■□□□ 1.38
SLIT3-204ENST00000518140 LSM7Q9UK45 103 aaKnown RBP23.67■■□□□ 1.38
SLIT3-204ENST00000518140 MAGEB16A2A368 324 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 GMNCA6NCL1 334 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 FAM47DPA6NHR8 397 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 CD160O95971 181 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 WDR4P57081 412 aaKnown RBP23.66■■□□□ 1.38
SLIT3-204ENST00000518140 ERVK-21P61565 698 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 RNF135Q8IUD6 432 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 SH3RF2Q8TEC5 729 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 DENND1AQ8TEH3 1009 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 PPP1R2P1Q96PQ5 205 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 AGAP2Q99490 1192 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 FEM1AQ9BSK4 669 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 SENP1Q9P0U3 644 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 UBA2Q9UBT2 640 aaPredicted RBP23.66■■□□□ 1.38
SLIT3-204ENST00000518140 HCFC2Q9Y5Z7 792 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 NOTCH4Q99466 2003 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 GOLGA8TH3BQL2 631 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 ARF5P84085 180 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 MGAT5Q09328 741 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 CYTH1Q15438 398 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 MROH9Q5TGP6 573 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 GRASPQ7Z6J2 395 aaPredicted RBP23.66■■□□□ 1.38
SLIT3-204ENST00000518140 CMTM8Q8IZV2 173 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 TDRD5Q8NAT2 981 aaKnown RBP23.66■■□□□ 1.38
SLIT3-204ENST00000518140 DDI1Q8WTU0 396 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 EXOC2Q96KP1 924 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 POLR1EQ9GZS1 481 aaKnown RBP23.66■■□□□ 1.38
SLIT3-204ENST00000518140 OR51B4Q9Y5P0 310 aa23.66■■□□□ 1.38
SLIT3-204ENST00000518140 PRPF4O43172 522 aaKnown RBP eCLIP23.65■■□□□ 1.38
SLIT3-204ENST00000518140 LUC7L3O95232 432 aaKnown RBP23.65■■□□□ 1.38
SLIT3-204ENST00000518140 SNRPAP09012 282 aaKnown RBP23.65■■□□□ 1.38
SLIT3-204ENST00000518140 PYGBP11216 843 aa23.65■■□□□ 1.38
SLIT3-204ENST00000518140 PCID2Q5JVF3 399 aa23.65■■□□□ 1.38
SLIT3-204ENST00000518140 PKN3Q6P5Z2 889 aa23.65■■□□□ 1.38
SLIT3-204ENST00000518140 MARK2Q7KZI7 788 aaKnown RBP23.65■■□□□ 1.38
SLIT3-204ENST00000518140 RASSF3Q86WH2 238 aa23.65■■□□□ 1.38
SLIT3-204ENST00000518140 ZSWIM3Q96MP5 696 aa23.65■■□□□ 1.38
SLIT3-204ENST00000518140 VPS45Q9NRW7 570 aa23.65■■□□□ 1.38
SLIT3-204ENST00000518140 SLC2A6Q9UGQ3 507 aa23.65■■□□□ 1.38
SLIT3-204ENST00000518140 ARHGAP26Q9UNA1 814 aa23.65■■□□□ 1.38
SLIT3-204ENST00000518140 GBF1Q92538 1859 aa23.65■■□□□ 1.38
SLIT3-204ENST00000518140 CCDC195A0A1B0GUA6 201 aa23.64■■□□□ 1.38
SLIT3-204ENST00000518140 AP3B1O00203 1094 aa23.64■■□□□ 1.38
SLIT3-204ENST00000518140 ZMPSTE24O75844 475 aa23.64■■□□□ 1.38
SLIT3-204ENST00000518140 MSLNQ13421 630 aaPredicted RBP23.64■■□□□ 1.38
SLIT3-204ENST00000518140 SLC1A5Q15758 541 aa23.64■■□□□ 1.38
SLIT3-204ENST00000518140 HSP90AA5PQ58FG0 334 aa23.64■■□□□ 1.38
SLIT3-204ENST00000518140 CNPY4Q8N129 248 aa23.64■■□□□ 1.38
SLIT3-204ENST00000518140 BANPQ8N9N5 519 aa23.64■■□□□ 1.38
SLIT3-204ENST00000518140 USP13Q92995 863 aaPredicted RBP23.64■■□□□ 1.38
SLIT3-204ENST00000518140 ALG14Q96F25 216 aa23.64■■□□□ 1.38
SLIT3-204ENST00000518140 ARNT2Q9HBZ2 717 aa23.64■■□□□ 1.38
SLIT3-204ENST00000518140 CAPN7Q9Y6W3 813 aa23.64■■□□□ 1.38
SLIT3-204ENST00000518140 TRANK1O15050 2925 aa23.64■■□□□ 1.37
SLIT3-204ENST00000518140 CSKP41240 450 aa23.64■■□□□ 1.37
SLIT3-204ENST00000518140 ESRP1Q6NXG1 681 aaKnown RBP23.64■■□□□ 1.37
SLIT3-204ENST00000518140 C6orf89Q6UWU4 347 aa23.64■■□□□ 1.37
SLIT3-204ENST00000518140 PACS1Q6VY07 963 aa23.64■■□□□ 1.37
SLIT3-204ENST00000518140 C12orf76Q8N812 135 aaPredicted RBP23.64■■□□□ 1.37
SLIT3-204ENST00000518140 ZNF707Q96C28 371 aaPredicted RBP23.64■■□□□ 1.37
SLIT3-204ENST00000518140 PSKH2Q96QS6 385 aa23.64■■□□□ 1.37
SLIT3-204ENST00000518140 MGME1Q9BQP7 344 aa23.64■■□□□ 1.37
SLIT3-204ENST00000518140 NOD2Q9HC29 1040 aa23.64■■□□□ 1.37
SLIT3-204ENST00000518140 NKIRAS1Q9NYS0 192 aa23.64■■□□□ 1.37
SLIT3-204ENST00000518140 SEPT3Q9UH03 358 aa23.64■■□□□ 1.37
SLIT3-204ENST00000518140 RFPL1O75677 317 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 KRT37O76014 449 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 CA4P22748 312 aa23.63■■□□□ 1.37
SLIT3-204ENST00000518140 HOXA9P31269 272 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms