RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 OR2AP1Q8NGE2 309 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 CCDC110Q8TBZ0 833 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 MAIP1Q8WWC4 291 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 MAGOHBQ96A72 148 aaKnown RBP10.03□□□□□ -0.8
CLN8-202ENST00000517514 PBXIP1Q96AQ6 731 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 MKRN2Q9H000 416 aaKnown RBP10.03□□□□□ -0.8
CLN8-202ENST00000517514 DDX47Q9H0S4 455 aaKnown RBP10.03□□□□□ -0.8
CLN8-202ENST00000517514 MFSD1Q9H3U5 465 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 CD93Q9NPY3 652 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 SEPT10Q9P0V9 454 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 RNF14Q9UBS8 474 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 SEPT3Q9UH03 358 aa10.03□□□□□ -0.8
CLN8-202ENST00000517514 EVLQ9UI08 416 aaPredicted RBP10.03□□□□□ -0.8
CLN8-202ENST00000517514 DOCK9Q9BZ29 2069 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 GCATO75600 419 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 METTL18O95568 372 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 GABRG2P18507 467 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 NDUFV2P19404 249 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 NFKB1P19838 968 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 CSNK1DP48730 415 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 RHOAP61586 193 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 RPS14P62263 151 aaKnown RBP10.02□□□□□ -0.81
CLN8-202ENST00000517514 SKOR1P84550 965 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 C2orf54Q08AI8 447 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 NUMA1Q14980 2115 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 MYLK3Q32MK0 819 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 EOGTQ5NDL2 527 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 ANKRD20A2Q5SQ80 823 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 ANKRD20A1Q5TYW2 823 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 ANKRD20A3Q5VUR7 823 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 HEATR6Q6AI08 1181 aaKnown RBP10.02□□□□□ -0.81
CLN8-202ENST00000517514 TRMT11Q7Z4G4 463 aaKnown RBP10.02□□□□□ -0.81
CLN8-202ENST00000517514 SRLQ86TD4 932 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 ZSWIM9Q86XI8 627 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 FBXL6Q8N531 539 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 SPATA4Q8NEY3 305 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 KIF18AQ8NI77 898 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 OXNAD1Q96HP4 312 aaPredicted RBP10.02□□□□□ -0.81
CLN8-202ENST00000517514 SPATA13Q96N96 652 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 AGAP3Q96P47 875 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 NUDCD1Q96RS6 583 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 NAP1L3Q99457 506 aaPredicted RBP10.02□□□□□ -0.81
CLN8-202ENST00000517514 CINPQ9BW66 212 aaPredicted RBP10.02□□□□□ -0.81
CLN8-202ENST00000517514 RSPH9Q9H1X1 276 aaPredicted RBP10.02□□□□□ -0.81
CLN8-202ENST00000517514 NOD2Q9HC29 1040 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 GLOD4Q9HC38 313 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 HECAQ9UBI9 543 aaPredicted RBP10.02□□□□□ -0.81
CLN8-202ENST00000517514 SUN2Q9UH99 717 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 AMACRQ9UHK6 382 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 PPM1HQ9ULR3 514 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 VPS13AQ96RL7 3174 aa10.02□□□□□ -0.81
CLN8-202ENST00000517514 CUL9Q8IWT3 2517 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 F5H423 210 aaPredicted RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 PLK4O00444 970 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 TRAFD1O14545 582 aaPredicted RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 MTSS1O43312 755 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 BNIP3LO60238 219 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 GPR37L1O60883 481 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 PAPSS2O95340 614 aaPredicted RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 PIGNO95427 931 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 AVPR2P30518 371 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 CHRNA3P32297 505 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 RPL22P35268 128 aaKnown RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 NNMTP40261 264 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 MAGEA9P43362 315 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 SNRPD1P62314 119 aaKnown RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 MRPS25P82663 173 aaKnown RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 DMWDQ09019 674 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 TRAF2Q12933 501 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 ZNF235Q14590 738 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 WHAMMP3Q1A5X7 153 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 ARSIQ5FYB1 569 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 CCDC137Q6PK04 289 aaKnown RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 KDELC1Q6UW63 502 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 METTL3Q86U44 580 aaKnown RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 RASSF3Q86WH2 238 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 OR2T3Q8NH03 318 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 ATL2Q8NHH9 583 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 SPATA22Q8NHS9 363 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 CCDC26Q8TAB7 109 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 ARRDC3Q96B67 414 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 IMP4Q96G21 291 aaKnown RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 MRGPRX1Q96LB2 322 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 GDAP1L1Q96MZ0 367 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 HHIPQ96QV1 700 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 SEMA3CQ99985 751 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 MLPHQ9BV36 600 aaPredicted RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 CPEB1Q9BZB8 566 aaKnown RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 SLC25A51Q9H1U9 297 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 GBA3Q9H227 469 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 L2HGDHQ9H9P8 463 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 PRMT8Q9NR22 394 aaPredicted RBP10.01□□□□□ -0.81
CLN8-202ENST00000517514 HOMER3Q9NSC5 361 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 EBF1Q9UH73 591 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 PCYOX1Q9UHG3 505 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 ZNF148Q9UQR1 794 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 CEP192Q8TEP8 1941 aa10.01□□□□□ -0.81
CLN8-202ENST00000517514 FANCMQ8IYD8 2048 aa10□□□□□ -0.81
CLN8-202ENST00000517514 TCRBV21S2A2A0A5A6 115 aa10□□□□□ -0.81
CLN8-202ENST00000517514 CFAP69A5D8W1 941 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms