RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 MICU2Q8IYU8 434 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 CBR4Q8N4T8 237 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 IRGQQ8WZA9 623 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 RNF145Q96MT1 663 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 WDR12Q9GZL7 423 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 MUC13Q9H3R2 512 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 HIPK3Q9H422 1215 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 PARVBQ9HBI1 364 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 LMCD1Q9NZU5 365 aa6.74□□□□□ -1.33
CPNE3-203ENST00000517490 TDRKHQ9Y2W6 561 aaKnown RBP6.74□□□□□ -1.33
CPNE3-203ENST00000517490 ASB14A6NK59 587 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 NPHS1O60500 1241 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ABCB7O75027 752 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 KATNA1O75449 491 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 DLGAP3O95886 979 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 FGFR1P11362 822 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 PROZP22891 400 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 NOS2P35228 1153 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 GPD2P43304 727 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 MAPK10P53779 464 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 AMHR2Q16671 573 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 IMPG1Q17R60 797 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 SH3D19Q5HYK7 790 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 BORAQ6PGQ7 559 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 SLC51AQ86UW1 340 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 STK32CQ86UX6 486 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 APOBEC3FQ8IUX4 373 aaKnown RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 TBC1D21Q8IYX1 336 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 VPS33AQ96AX1 596 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 CENPNQ96H22 339 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 CPB2Q96IY4 423 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 KCTD15Q96SI1 283 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ADI1Q9BV57 179 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 USP29Q9HBJ7 922 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 CD320Q9NPF0 282 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 TBC1D13Q9NVG8 400 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 TRNAU1APQ9NX07 287 aaKnown RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 MAFBQ9Y5Q3 323 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 DLEC1Q9Y238 1755 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 TP73O15350 636 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 LBPP18428 481 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ATP6V1B2P21281 511 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 UBA1P22314 1058 aaKnown RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 CCR3P51677 355 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 POU4F1Q01851 419 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 RFTN1Q14699 578 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 PPM1LQ5SGD2 360 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 MRNIPQ6NTE8 343 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 SLC26A9Q7LBE3 791 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 DQX1Q8TE96 717 aaKnown RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 NCSTNQ92542 709 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ROPN1LQ96C74 230 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 OMDQ99983 421 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 HPS4Q9NQG7 708 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 SFMBT1Q9UHJ3 866 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 GLI3P10071 1580 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 A0A087WZ62 844 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 SH3PXD2BA1X283 911 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 BUD23O43709 281 aaKnown RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 AP2A1O95782 977 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 HOXB8P17481 243 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 NFKB1P19838 968 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ATP6V1E1P36543 226 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 RHDQ02161 417 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ADIGQ0VDE8 80 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 GRM2Q14416 872 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 DPYSL2Q16555 572 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF829Q3KNS6 432 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 BTBD8Q5XKL5 378 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 NEPROQ6NW34 567 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ZDHHC13Q8IUH4 622 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 SNX31Q8N9S9 440 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 FAM156AQ8NDB6 213 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 MZB1Q8WU39 189 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 AFG1LQ8WV93 481 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 RORBQ92753 470 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 WNT8BQ93098 351 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 OLFM1Q99784 485 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 FDXACB1Q9BRP7 624 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 GPATCH1Q9BRR8 931 aaKnown RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 UGT2B28Q9BY64 529 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 YTHDF1Q9BYJ9 559 aaKnown RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 SENP6Q9GZR1 1112 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 NACA2Q9H009 215 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 MID1IP1Q9NPA3 183 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 GIN1Q9NXP7 522 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 SMPD3Q9NY59 655 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 GNPTGQ9UJJ9 305 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 PTPRJQ12913 1337 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ZNF487B1APH4 448 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 ASNA1O43681 348 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 HNRNPLP14866 589 aaKnown RBP eCLIP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 MATKP42679 507 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 MAPK8P45983 427 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 CLCN5P51795 746 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 FSTL1Q12841 308 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 MGAT5BQ3V5L5 792 aa6.73□□□□□ -1.33
CPNE3-203ENST00000517490 PPP1R26Q5T8A7 1209 aaPredicted RBP6.73□□□□□ -1.33
CPNE3-203ENST00000517490 SH3PXD2AQ5TCZ1 1133 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms