RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 RBM12BQ8IXT5 1001 aaKnown RBP13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 C1orf127Q8N9H9 656 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 SOCS4Q8WXH5 440 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 ARMC7Q9H6L4 198 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 PNPLA8Q9NP80 782 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 DDX28Q9NUL7 540 aaKnown RBP13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 SLC8A2Q9UPR5 921 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 COL4A1P02462 1669 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 FAM95CA0A1B0GW59 222 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 RNASEH2AO75792 299 aaKnown RBP13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 AKR1A1P14550 325 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 CPOXP36551 454 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 YAP1P46937 504 aaKnown RBP13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 ADIGQ0VDE8 80 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 GRM3Q14832 879 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 STK32CQ86UX6 486 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 TMEM192Q8IY95 271 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 ARFGAP1Q8N6T3 406 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 RIN3Q8TB24 985 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 DNAJB14Q8TBM8 379 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 DNAJB3Q8WWF6 145 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 TNIP3Q96KP6 325 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 CDHR5Q9HBB8 845 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 SARS2Q9NP81 518 aaKnown RBP13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 MFHAS1Q9Y4C4 1052 aa13.76□□□□□ -0.21
SH3TC1-225ENST00000515682 UBR2Q8IWV8 1755 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 C16orf96A6NNT2 1141 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 PTPN1P18031 435 aaKnown RBP13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 TRPC1P48995 793 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 NAB1Q13506 487 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 TRIM25Q14258 630 aaKnown RBP13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 DEFB115Q30KQ5 88 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 AGAP9Q5VTM2 703 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 SPPL2CQ8IUH8 684 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 MAPK15Q8TD08 544 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 C9orf16Q9BUW7 83 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 FICDQ9BVA6 458 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 NSMCE4AQ9NXX6 385 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 DTLQ9NZJ0 730 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 KIAA1257Q9ULG3 409 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 PPME1Q9Y570 386 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 ANKRD12Q6UB98 2062 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 DHRS12A0PJE2 317 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 NEMP2A6NFY4 417 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 PRDX6P30041 224 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 SERPINB1P30740 379 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 KCNK10P57789 538 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 HSDL1Q3SXM5 330 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 GLMNQ92990 594 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 CCDC97Q96F63 343 aaPredicted RBP13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 RBBP8Q99708 897 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 MAGEB5Q9BZ81 275 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 DGKBQ9Y6T7 804 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 DDX60Q8IY21 1712 aaKnown RBP13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 A0A1W2PPW3 197 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 CABYRO75952 493 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 HDCP19113 662 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 NFKB1P19838 968 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 MYBPC1Q00872 1141 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 PSTKQ8IV42 348 aaKnown RBP13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 SHCBP1Q8NEM2 672 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 APPL2Q8NEU8 664 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 DACH2Q96NX9 599 aa13.75□□□□□ -0.21
SH3TC1-225ENST00000515682 BTAF1O14981 1849 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 TBC1D4O60343 1298 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 GPD2P43304 727 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 LIMK2P53671 638 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CDH13P55290 713 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CDKL1Q00532 357 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 DPYSQ14117 519 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 GALNT18Q6P9A2 607 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 EPGNQ6UW88 154 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 ATPAF2Q8N5M1 289 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CCDC185Q8N715 623 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 ZBTB8BQ8NAP8 495 aaPredicted RBP13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 ZNF555Q8NEP9 628 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 GIPC2Q8TF65 315 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 NXNL1Q96CM4 212 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 IFT43Q96FT9 208 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 HAPLN2Q9GZV7 340 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 PALMDQ9NP74 551 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 ZDHHC7Q9NXF8 308 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 TRIM17Q9Y577 477 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 FADS3Q9Y5Q0 445 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 E7ENX8 843 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 H3BNX3 289 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CILPO75339 1184 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 GCATO75600 419 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 LDLRP01130 860 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CD4P01730 458 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 ATP6V1B2P21281 511 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 PCSK6P29122 969 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 MS4A2Q01362 244 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 HNRNPDQ14103 355 aaKnown RBP13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CAPRIN1Q14444 709 aaKnown RBP13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 CARTPTQ16568 116 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 FAM117BQ6P1L5 589 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 GLB1LQ6UWU2 654 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 B3GNT9Q6UX72 402 aa13.74□□□□□ -0.21
SH3TC1-225ENST00000515682 PQLC3Q8N755 202 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms