RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 ITIH1P19827 911 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 HNRNPA2B1P22626 353 aaKnown RBP8.6□□□□□ -1.03
TRIM6-211ENST00000515022 MTIF2P46199 727 aaKnown RBP8.6□□□□□ -1.03
TRIM6-211ENST00000515022 MARSP56192 900 aaKnown RBP8.6□□□□□ -1.03
TRIM6-211ENST00000515022 DAOAP59103 153 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 HNRNPKP61978 463 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM6-211ENST00000515022 MYL5Q02045 173 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 SPIDRQ14159 915 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 FGL2Q14314 439 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 DLG2Q15700 870 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 FAM46CQ5VWP2 391 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 NUGGCQ68CJ6 796 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 ARHGAP17Q68EM7 881 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 KRT39Q6A163 491 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 MSANTD2Q6P1R3 559 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 RAB11FIP2Q7L804 512 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 ABI3BPQ7Z7G0 1075 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 HORMAD1Q86X24 394 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 UNC45BQ8IWX7 931 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 ZNF564Q8TBZ8 553 aaPredicted RBP8.6□□□□□ -1.03
TRIM6-211ENST00000515022 BMFQ96LC9 184 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 CCDC3Q9BQI4 270 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 DUSP23Q9BVJ7 150 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 IMPG2Q9BZV3 1241 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 LRRC4CQ9HCJ2 640 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 TMEM8AQ9HCN3 771 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 PREBQ9HCU5 417 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 ABCC13Q9NSE7 274 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 GEMIN8Q9NWZ8 242 aaKnown RBP8.6□□□□□ -1.03
TRIM6-211ENST00000515022 FOXJ2Q9P0K8 574 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 IPO11Q9UI26 975 aaKnown RBP8.6□□□□□ -1.03
TRIM6-211ENST00000515022 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.6□□□□□ -1.03
TRIM6-211ENST00000515022 CRYBG3Q68DQ2 2970 aa8.6□□□□□ -1.03
TRIM6-211ENST00000515022 MED13Q9UHV7 2174 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 CSMD1Q96PZ7 3565 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 PRAMEF33A0A0G2JMD5 474 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 A6NNZ2 444 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 C1QTNF3-AMACRE9PGA6 284 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 GOLGA6L19H0YKK7 550 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 PMM2O15305 246 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 AQP9O43315 295 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 PRAMEF10O60809 474 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 GCATO75600 419 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 TCEA3O75764 348 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 CSF2P04141 144 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 CELA2BP08218 269 aaPredicted RBP8.59□□□□□ -1.03
TRIM6-211ENST00000515022 SFTPCP11686 197 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 TACR2P21452 398 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 EEF1GP26641 437 aaKnown RBP8.59□□□□□ -1.03
TRIM6-211ENST00000515022 NNMTP40261 264 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 ETV5P41161 510 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 ADKP55263 362 aaKnown RBP8.59□□□□□ -1.03
TRIM6-211ENST00000515022 SLC8A3P57103 927 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 SH3BP2P78314 561 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 EIF2B5Q13144 721 aaKnown RBP8.59□□□□□ -1.03
TRIM6-211ENST00000515022 SERINC3Q13530 473 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 NCAPHQ15003 741 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 XKR5Q6UX68 686 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 C11orf57Q6ZUT1 292 aaPredicted RBP8.59□□□□□ -1.03
TRIM6-211ENST00000515022 DSG4Q86SJ6 1040 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 CHSY1Q86X52 802 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 FAM26EQ8N5C1 309 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 ZNF557Q8N988 423 aaPredicted RBP8.59□□□□□ -1.03
TRIM6-211ENST00000515022 CHST14Q8NCH0 376 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 OR52K2Q8NGK3 314 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 TPCN2Q8NHX9 752 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 DQX1Q8TE96 717 aaKnown RBP8.59□□□□□ -1.03
TRIM6-211ENST00000515022 MED15Q96RN5 788 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 IL12RB2Q99665 862 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 DDX50Q9BQ39 737 aaKnown RBP8.59□□□□□ -1.03
TRIM6-211ENST00000515022 TSPY26PQ9H489 355 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 PRM3Q9NNZ6 103 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 ZNF71Q9NQZ8 489 aaPredicted RBP8.59□□□□□ -1.03
TRIM6-211ENST00000515022 SAMSN1Q9NSI8 373 aaKnown RBP8.59□□□□□ -1.03
TRIM6-211ENST00000515022 FANCLQ9NW38 375 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 SIRPGQ9P1W8 387 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 GULP1Q9UBP9 304 aa8.59□□□□□ -1.03
TRIM6-211ENST00000515022 LRRC10BA6NIK2 292 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 K7ERQ8 282 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 P4HA2O15460 535 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 PAK4O96013 591 aaPredicted RBP8.58□□□□□ -1.04
TRIM6-211ENST00000515022 MT-CO1P00395 513 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 LTFP02788 710 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 FYNP06241 537 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 LIPCP11150 499 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 NME1P15531 152 aaKnown RBP8.58□□□□□ -1.04
TRIM6-211ENST00000515022 IRAK1P51617 712 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 MAPK10P53779 464 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 INHBCP55103 352 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 CCL7P80098 99 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 PRR20EP86478 221 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 PRR20CP86479 221 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 PRR20DP86480 221 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 PRR20BP86481 221 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 PRR20AP86496 221 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 BST2Q10589 180 aaKnown RBP8.58□□□□□ -1.04
TRIM6-211ENST00000515022 PDE1CQ14123 709 aaPredicted RBP8.58□□□□□ -1.04
TRIM6-211ENST00000515022 AGERQ15109 404 aa8.58□□□□□ -1.04
TRIM6-211ENST00000515022 ZC3H12AQ5D1E8 599 aaKnown RBP8.58□□□□□ -1.04
TRIM6-211ENST00000515022 PRRT3Q5FWE3 981 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms