RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 FNDC3BQ53EP0 1204 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 GLE1Q53GS7 698 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 CARD16Q5EG05 197 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 C9orf64Q5T6V5 341 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 SERPINA13PQ6UXR4 307 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 TRIM67Q6ZTA4 783 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 CCDC89Q8N998 374 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 TSEN2Q8NCE0 465 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 OR2A12Q8NGT7 310 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 ARRDC2Q8TBH0 407 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 LRRN4Q8WUT4 740 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 VOPP1Q96AW1 172 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 IMP4Q96G21 291 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 CCDC114Q96M63 670 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 TUBGCP5Q96RT8 1024 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 KRT12Q99456 494 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 GBA3Q9H227 469 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 C10orf88Q9H8K7 445 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 GLOD4Q9HC38 313 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 CD248Q9HCU0 757 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 NT5MQ9NPB1 228 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 VPS45Q9NRW7 570 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 MMP17Q9ULZ9 603 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 FCF1Q9Y324 198 aaKnown RBP12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 ACTL7AQ9Y615 435 aa12.15□□□□□ -0.46
PDLIM5-220ENST00000514830 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 FAM170BA6NMN3 283 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 ERI2A8K979 691 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 TTC34A8MYJ7 566 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 ZBTB24O43167 697 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 ADAM23O75077 832 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 ATG13O75143 517 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 RNF40O75150 1001 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 POP4O95707 220 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 PRKCHP24723 683 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 TIE1P35590 1138 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 FDFT1P37268 417 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 MAGEA6P43360 314 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 C2orf54Q08AI8 447 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 ELAVL3Q14576 367 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 EOGTQ5NDL2 527 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 EMC10Q5UCC4 262 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 SDE2Q6IQ49 451 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 LEKR1Q6ZMV7 388 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 B4GALNT4Q76KP1 1039 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 GSTA5Q7RTV2 222 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 PID1Q7Z2X4 250 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 SRLQ86TD4 932 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 JAMLQ86YT9 394 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 KLHL7Q8IXQ5 586 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 CHPFQ8IZ52 775 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 CCDC110Q8TBZ0 833 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 HCAR2Q8TDS4 363 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 AGAP3Q96P47 875 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 ACOX2Q99424 681 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 CARD6Q9BX69 1037 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 CHRDQ9H2X0 955 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 LMAN1LQ9HAT1 526 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 SEPT10Q9P0V9 454 aa12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 KLHL8Q9P2G9 620 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 NDRG2Q9UN36 371 aaKnown RBP12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 MTF2Q9Y483 593 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 PTPRZ1P23471 2315 aaPredicted RBP12.14□□□□□ -0.47
PDLIM5-220ENST00000514830 A0A1W2PQ67 120 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 BHMG1C9JSJ3 638 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 INSIG1O15503 277 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 SOCS5O75159 536 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 ANXA9O76027 345 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 NEBLO76041 1014 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 KLF8O95600 359 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 KRT14P02533 472 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 MMP2P08253 660 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 NFKB1P19838 968 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 RPL22P35268 128 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 RECQLP46063 649 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 RGRP47804 291 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 CLCN5P51795 746 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 CCNHP51946 323 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 NUBP1P53384 320 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 RAD51Q06609 339 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 SEMA5AQ13591 1074 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 UBXN2BQ14CS0 331 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 MYLK3Q32MK0 819 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 ACCSLQ4AC99 568 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 C2orf27AQ580R0 203 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 NCEH1Q6PIU2 408 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 ARHGEF18Q6ZSZ5 1173 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 Q6ZVU0 165 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 SYT13Q7L8C5 426 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 PRPF39Q86UA1 669 aaKnown RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 FBXL6Q8N531 539 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 GLIS1Q8NBF1 620 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 TMIEQ8NEW7 156 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 SEC14L1Q92503 715 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 ZNF641Q96N77 438 aaPredicted RBP12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 SEMA3CQ99985 751 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 HEPHQ9BQS7 1158 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 OSBPL1AQ9BXW6 950 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 FOXQ1Q9C009 403 aa12.13□□□□□ -0.47
PDLIM5-220ENST00000514830 PRSS16Q9NQE7 514 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms