RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 SLC25A51Q9H1U9 297 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 TNKS2Q9H2K2 1166 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 ETNK1Q9HBU6 452 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 ASIC3Q9UHC3 531 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 MRPS17Q9Y2R5 130 aaKnown RBP12.71□□□□□ -0.37
PDPN-210ENST00000513143 UTP11Q9Y3A2 253 aaKnown RBP12.71□□□□□ -0.37
PDPN-210ENST00000513143 TTLL3Q9Y4R7 772 aa12.71□□□□□ -0.37
PDPN-210ENST00000513143 NCOR1O75376 2440 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 HEXIM1O94992 359 aaKnown RBP12.7□□□□□ -0.38
PDPN-210ENST00000513143 IGSF6O95976 241 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 MMP2P08253 660 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 PRKCHP24723 683 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 PSMB4P28070 264 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 ADCY8P40145 1251 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 IL12RB1P42701 662 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 VPS41P49754 854 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 DRG2P55039 364 aaKnown RBP12.7□□□□□ -0.38
PDPN-210ENST00000513143 SEC13P55735 322 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 SNRPD1P62314 119 aaKnown RBP12.7□□□□□ -0.38
PDPN-210ENST00000513143 MRPS21P82921 87 aaKnown RBP12.7□□□□□ -0.38
PDPN-210ENST00000513143 ZXDAP98168 799 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 DSC2Q02487 901 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 SEMA5AQ13591 1074 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 HNRNPA1L2Q32P51 320 aaKnown RBP12.7□□□□□ -0.38
PDPN-210ENST00000513143 CARD16Q5EG05 197 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 TEX35Q5T0J7 233 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 SERPINA13PQ6UXR4 307 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 Q6ZVU0 165 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 SRLQ86TD4 932 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 SIX5Q8N196 739 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 OR2AP1Q8NGE2 309 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 SEC14L1Q92503 715 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 PTPRN2Q92932 1015 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 TADA1Q96BN2 335 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 LRRC45Q96CN5 670 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 EXOC2Q96KP1 924 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 GDAP1L1Q96MZ0 367 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 PPP1R2P1Q96PQ5 205 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 ACOX2Q99424 681 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 NELL2Q99435 816 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 SEMA3CQ99985 751 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 GORASP1Q9BQQ3 440 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 TM6SF2Q9BZW4 377 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 LTB4R2Q9NPC1 389 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 RAB6BQ9NRW1 208 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 SUN2Q9UH99 717 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 DMGDHQ9UI17 866 aaKnown RBP12.7□□□□□ -0.38
PDPN-210ENST00000513143 NDRG2Q9UN36 371 aaKnown RBP12.7□□□□□ -0.38
PDPN-210ENST00000513143 STON1Q9Y6Q2 735 aa12.7□□□□□ -0.38
PDPN-210ENST00000513143 EDDM13A0A1B0GTR0 161 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 KANSL1LA0AUZ9 987 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 TTC24A2A3L6 582 aaPredicted RBP12.69□□□□□ -0.38
PDPN-210ENST00000513143 TARSL2A2RTX5 802 aaKnown RBP12.69□□□□□ -0.38
PDPN-210ENST00000513143 WASH3PC4AMC7 463 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 DNALI1O14645 258 aaPredicted RBP12.69□□□□□ -0.38
PDPN-210ENST00000513143 INSIG1O15503 277 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 GJB3O75712 270 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 RHOXF2BP0C7M4 288 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 CHRNB1P11230 501 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 NTSR1P30989 418 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 MAGEA6P43360 314 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 MAPK8P45983 427 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 SCNN1BP51168 640 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 SKOR1P84550 965 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 PRPSAP1Q14558 356 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 IHHQ14623 411 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 SLC14A2Q15849 920 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 MYLK3Q32MK0 819 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 ATXN7L2Q5T6C5 722 aaPredicted RBP12.69□□□□□ -0.38
PDPN-210ENST00000513143 NCEH1Q6PIU2 408 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 DPY19L3Q6ZPD9 716 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 TRMT11Q7Z4G4 463 aaKnown RBP12.69□□□□□ -0.38
PDPN-210ENST00000513143 PRPF39Q86UA1 669 aaKnown RBP12.69□□□□□ -0.38
PDPN-210ENST00000513143 CHPFQ8IZ52 775 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 IL17RCQ8NAC3 791 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 OR2A12Q8NGT7 310 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 SPATA22Q8NHS9 363 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 OXNAD1Q96HP4 312 aaPredicted RBP12.69□□□□□ -0.38
PDPN-210ENST00000513143 NSMCE3Q96MG7 304 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 RBM15Q96T37 977 aaKnown RBP eCLIP12.69□□□□□ -0.38
PDPN-210ENST00000513143 RHOXF2Q9BQY4 288 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 TRIM31Q9BZY9 425 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 NOD2Q9HC29 1040 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 ZDHHC4Q9NPG8 344 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 CACNA2D2Q9NY47 1150 aa12.69□□□□□ -0.38
PDPN-210ENST00000513143 EVLQ9UI08 416 aaPredicted RBP12.69□□□□□ -0.38
PDPN-210ENST00000513143 AAR2Q9Y312 384 aaKnown RBP12.69□□□□□ -0.38
PDPN-210ENST00000513143 ERI2A8K979 691 aaKnown RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 F5H423 210 aaPredicted RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 PSMD3O43242 534 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 RNF40O75150 1001 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 ANXA9O76027 345 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 SEC31AO94979 1220 aaKnown RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 POP4O95707 220 aaKnown RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 MT-CYBP00156 380 aaPredicted RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 SERPINF2P08697 491 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 HLA-EP13747 358 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 TARSP26639 723 aaKnown RBP12.68□□□□□ -0.38
PDPN-210ENST00000513143 CD86P42081 329 aa12.68□□□□□ -0.38
PDPN-210ENST00000513143 RECQLP46063 649 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms