RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 PTK2BQ14289 1009 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 DRAP1Q14919 205 aaPredicted RBP14.19□□□□□ -0.14
SPCS3-204ENST00000513139 ESRP1Q6NXG1 681 aaKnown RBP14.19□□□□□ -0.14
SPCS3-204ENST00000513139 RAB11FIP2Q7L804 512 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 ZSCAN1Q8NBB4 408 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 CHST14Q8NCH0 376 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 DENND6BQ8NEG7 585 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 FAM204AQ9H8W3 233 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 METTL14Q9HCE5 456 aaKnown RBP14.19□□□□□ -0.14
SPCS3-204ENST00000513139 DDIT4Q9NX09 232 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 APOBEC3BQ9UH17 382 aaKnown RBP14.19□□□□□ -0.14
SPCS3-204ENST00000513139 VPS51Q9UID3 782 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 CHD5Q8TDI0 1954 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 LRP4O75096 1905 aa14.19□□□□□ -0.14
SPCS3-204ENST00000513139 E5RJQ4 531 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 K7ERQ8 282 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 SMAD6O43541 496 aaKnown RBP14.18□□□□□ -0.14
SPCS3-204ENST00000513139 LEFTY1O75610 366 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 CALCAP01258 141 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 ANXA6P08133 673 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 RRM1P23921 792 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 L1CAMP32004 1257 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 CCKBRP32239 447 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 GCNT1Q02742 428 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 TLE1Q04724 770 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 UBAP2LQ14157 1087 aaKnown RBP14.18□□□□□ -0.14
SPCS3-204ENST00000513139 TGIF1Q15583 401 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 TBR1Q16650 682 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 PRRT3Q5FWE3 981 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 TPRG1LQ5T0D9 272 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 ISM2Q6H9L7 571 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 C22orf39Q6P5X5 142 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 DPY19L3Q6ZPD9 716 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 SETD3Q86TU7 594 aaPredicted RBP14.18□□□□□ -0.14
SPCS3-204ENST00000513139 JAMLQ86YT9 394 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 ELOA2Q8IYF1 753 aaPredicted RBP14.18□□□□□ -0.14
SPCS3-204ENST00000513139 DCAF4L2Q8NA75 395 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 GRIN3AQ8TCU5 1115 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 CCDC34Q96HJ3 373 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 TSG101Q99816 390 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 SLC25A18Q9H1K4 315 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 CLSTN2Q9H4D0 955 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 EPB41L5Q9HCM4 733 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 GEMIN8Q9NWZ8 242 aaKnown RBP14.18□□□□□ -0.14
SPCS3-204ENST00000513139 CNTN6Q9UQ52 1028 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 WASF2Q9Y6W5 498 aa14.18□□□□□ -0.14
SPCS3-204ENST00000513139 D6RAR5 112 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 CASC3O15234 703 aaKnown RBP14.17□□□□□ -0.14
SPCS3-204ENST00000513139 YY2O15391 372 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 TSPAN6O43657 245 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 SNAP91O60641 907 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 THOP1P52888 689 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 ADKP55263 362 aaKnown RBP14.17□□□□□ -0.14
SPCS3-204ENST00000513139 CETN1Q12798 172 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 COBLL1Q53SF7 1204 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 LVRNQ6Q4G3 990 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 B3GNT8Q7Z7M8 397 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 SMYD4Q8IYR2 804 aaPredicted RBP14.17□□□□□ -0.14
SPCS3-204ENST00000513139 PHACTR4Q8IZ21 702 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 LMO3Q8TAP4 145 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 KAT5Q92993 513 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 SMARCE1Q969G3 411 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 RAB7BQ96AH8 199 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 TMEM74Q96NL1 305 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 SLC2A13Q96QE2 648 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 GFM1Q96RP9 751 aaKnown RBP14.17□□□□□ -0.14
SPCS3-204ENST00000513139 LRRC61Q9BV99 259 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 SLC13A1Q9BZW2 595 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 CEP44Q9C0F1 390 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 ADNPQ9H2P0 1102 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 ASNSD1Q9NWL6 643 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 HOOK1Q9UJC3 728 aaKnown RBP14.17□□□□□ -0.14
SPCS3-204ENST00000513139 PCDHGA4Q9Y5G9 962 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 HS3ST4Q9Y661 456 aa14.17□□□□□ -0.14
SPCS3-204ENST00000513139 ARHGEF17Q96PE2 2063 aaPredicted RBP14.16□□□□□ -0.14
SPCS3-204ENST00000513139 IGLON5A6NGN9 336 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 M0QYT0 321 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 BIN1O00499 593 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 TOR1BO14657 336 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 P4HA2O15460 535 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 MED7O43513 233 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 PAGE1O75459 146 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 ZNF821O75541 412 aaPredicted RBP14.16□□□□□ -0.14
SPCS3-204ENST00000513139 SMC2O95347 1197 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 RHOCP08134 193 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 PRCPP42785 496 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 YPEL5P62699 121 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 LRRC63Q05C16 580 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 SLC20A2Q08357 652 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 MORC3Q14149 939 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 TAF5Q15542 800 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 EFHC1Q5JVL4 640 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 MANEAQ5SRI9 462 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 DENND1BQ6P3S1 775 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 RBFAQ8N0V3 343 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 DEFB106AQ8N104 65 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 SDR16C5Q8N3Y7 309 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 PCDH20Q8N6Y1 951 aaKnown RBP14.16□□□□□ -0.14
SPCS3-204ENST00000513139 ARL10Q8N8L6 244 aa14.16□□□□□ -0.14
SPCS3-204ENST00000513139 SPATA20Q8TB22 786 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms