RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 IFT81Q8WYA0 676 aa11.02□□□□□ -0.65
PFDN1-204ENST00000512707 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.02□□□□□ -0.65
PFDN1-204ENST00000512707 SHDQ96IW2 340 aa11.02□□□□□ -0.65
PFDN1-204ENST00000512707 RPL10LQ96L21 214 aaKnown RBP11.02□□□□□ -0.65
PFDN1-204ENST00000512707 FCRL5Q96RD9 977 aa11.02□□□□□ -0.65
PFDN1-204ENST00000512707 MGME1Q9BQP7 344 aa11.02□□□□□ -0.65
PFDN1-204ENST00000512707 FSD1LQ9BXM9 530 aa11.02□□□□□ -0.65
PFDN1-204ENST00000512707 LRRC40Q9H9A6 602 aa11.02□□□□□ -0.65
PFDN1-204ENST00000512707 EIF2B3Q9NR50 452 aaKnown RBP11.02□□□□□ -0.65
PFDN1-204ENST00000512707 DMGDHQ9UI17 866 aaKnown RBP11.02□□□□□ -0.65
PFDN1-204ENST00000512707 FBXL21Q9UKT6 434 aa11.02□□□□□ -0.65
PFDN1-204ENST00000512707 SHOC2Q9UQ13 582 aa11.02□□□□□ -0.65
PFDN1-204ENST00000512707 MRPS17Q9Y2R5 130 aaKnown RBP11.02□□□□□ -0.65
PFDN1-204ENST00000512707 SNX24Q9Y343 169 aa11.02□□□□□ -0.65
PFDN1-204ENST00000512707 NYNRINQ9P2P1 1898 aaKnown RBP11.02□□□□□ -0.65
PFDN1-204ENST00000512707 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-204ENST00000512707 TRIM24O15164 1050 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 ATP9BO43861 1147 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 ERLIN1O75477 346 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 GSRP00390 522 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 TPSB2P20231 275 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 CTSOP43234 321 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-204ENST00000512707 RPL21P46778 160 aaKnown RBP11.01□□□□□ -0.65
PFDN1-204ENST00000512707 CSNK1DP48730 415 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 STK19P49842 368 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-204ENST00000512707 SCNN1BP51168 640 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 GALK1P51570 392 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 NRLP54845 237 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 PRKCQQ04759 706 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 MPP3Q13368 585 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 CYTH1Q15438 398 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 TPSAB1Q15661 275 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 DLG2Q15700 870 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 ELF2Q15723 593 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 MLF2Q15773 248 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-204ENST00000512707 SLC14A2Q15849 920 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 FBXO43Q4G163 708 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 SLC44A4Q53GD3 710 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 ALG1LQ6GMV1 187 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 NAPEPLDQ6IQ20 393 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 WDR93Q6P2C0 686 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 ZNF852Q6ZMS4 543 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 TPRG1Q6ZUI0 275 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 PRUNE1Q86TP1 453 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 UBALD2Q8IYN6 164 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 PHTF2Q8N3S3 785 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.01□□□□□ -0.65
PFDN1-204ENST00000512707 CNTD1Q8N815 330 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 TSEN2Q8NCE0 465 aaKnown RBP11.01□□□□□ -0.65
PFDN1-204ENST00000512707 OR2AP1Q8NGE2 309 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 CYB5D2Q8WUJ1 264 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 SEC14L1Q92503 715 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 CHFRQ96EP1 664 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 IFT43Q96FT9 208 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 IMP4Q96G21 291 aaKnown RBP11.01□□□□□ -0.65
PFDN1-204ENST00000512707 NUDCD1Q96RS6 583 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 SEMA3CQ99985 751 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 FOXP3Q9BZS1 431 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 ANKZF1Q9H8Y5 726 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 ETNK1Q9HBU6 452 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 GDF3Q9NR23 364 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 ARGLU1Q9NWB6 273 aaPredicted RBP11.01□□□□□ -0.65
PFDN1-204ENST00000512707 FAM153AQ9UHL3 310 aa11.01□□□□□ -0.65
PFDN1-204ENST00000512707 FCF1Q9Y324 198 aaKnown RBP11.01□□□□□ -0.65
PFDN1-204ENST00000512707 EDDM13A0A1B0GTR0 161 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 ESYT3A0FGR9 886 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 PRRT4C9JH25 899 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 F5H423 210 aaPredicted RBP11□□□□□ -0.65
PFDN1-204ENST00000512707 K7ERQ8 282 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 INSIG1O15503 277 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 CTIFO43310 598 aaKnown RBP11□□□□□ -0.65
PFDN1-204ENST00000512707 NARSO43776 548 aaKnown RBP11□□□□□ -0.65
PFDN1-204ENST00000512707 BNIP3LO60238 219 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 METTL18O95568 372 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 MT-CO1P00395 513 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 TNFRSF8P28908 595 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 SERPINA4P29622 427 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 CD68P34810 354 aaPredicted RBP11□□□□□ -0.65
PFDN1-204ENST00000512707 CD86P42081 329 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 ITGA8P53708 1063 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 TERF1P54274 439 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 PLTPP55058 493 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 MAXP61244 160 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 PON2Q15165 354 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 CARD16Q5EG05 197 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 CFAP58Q5T655 872 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 RNASEH2BQ5TBB1 312 aaKnown RBP11□□□□□ -0.65
PFDN1-204ENST00000512707 FAXCQ5TGI0 409 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 TMEM215Q68D42 235 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 DSG4Q86SJ6 1040 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 SRLQ86TD4 932 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 PLPP6Q8IY26 295 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 ZNF513Q8N8E2 541 aaPredicted RBP11□□□□□ -0.65
PFDN1-204ENST00000512707 SORCS1Q8WY21 1168 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 FAM3CQ92520 227 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 EXOC2Q96KP1 924 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 TUBGCP5Q96RT8 1024 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 RBM15Q96T37 977 aaKnown RBP eCLIP11□□□□□ -0.651e-6■■■■□ 21.5
PFDN1-204ENST00000512707 TM6SF2Q9BZW4 377 aa11□□□□□ -0.65
PFDN1-204ENST00000512707 ATP13A3Q9H7F0 1226 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms