RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 MPP6Q9NZW5 540 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 HECAQ9UBI9 543 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-216ENST00000512683 HPCAL4Q9UM19 191 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 CA5BQ9Y2D0 317 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 DAAM1Q9Y4D1 1078 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 DOCK9Q9BZ29 2069 aa12.8□□□□□ -0.36
VEGFA-216ENST00000512683 EME2A4GXA9 379 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-216ENST00000512683 ZSCAN5CA6NGD5 496 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-216ENST00000512683 F8VZ95 297 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 ERVH48-1M5A8F1 160 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 PES1O00541 588 aaKnown RBP12.79□□□□□ -0.36
VEGFA-216ENST00000512683 RHOQP17081 205 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 TFE3P19532 575 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-216ENST00000512683 ADRA1BP35368 520 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 GGCXP38435 758 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 PFN3P60673 137 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 SNRPD1P62314 119 aaKnown RBP12.79□□□□□ -0.36
VEGFA-216ENST00000512683 RAD51Q06609 339 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 FZD2Q14332 565 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 POLD3Q15054 466 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-216ENST00000512683 KRT31Q15323 416 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 ZNF805Q5CZA5 627 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 ARTNQ5T4W7 220 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 SEL1L3Q68CR1 1132 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 LINGO4Q6UY18 593 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 KDM7AQ6ZMT4 941 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 TMC6Q7Z403 805 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 TFAP2DQ7Z6R9 452 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 NOP9Q86U38 636 aaKnown RBP12.79□□□□□ -0.36
VEGFA-216ENST00000512683 SLC22A18ASQ8N1D0 253 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 SDR16C5Q8N3Y7 309 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 OR7D4Q8NG98 312 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 MAPK15Q8TD08 544 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 HCAR2Q8TDS4 363 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 KLK6Q92876 244 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 CRELD1Q96HD1 420 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 LGMNQ99538 433 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 KLF6Q99612 283 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-216ENST00000512683 C1QTNF7Q9BXJ2 289 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 VPS16Q9H269 839 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 GANQ9H2C0 597 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 FANCLQ9NW38 375 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 SPASTQ9UBP0 616 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 OR12D3Q9UGF7 316 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 PCDHGA8Q9Y5G5 932 aa12.79□□□□□ -0.36
VEGFA-216ENST00000512683 POM121BA6NF01 834 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 C16orf96A6NNT2 1141 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 FFAR2O15552 330 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 AQP9O43315 295 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 USP12O75317 370 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 CSO75390 466 aaKnown RBP12.78□□□□□ -0.36
VEGFA-216ENST00000512683 GSRP00390 522 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 FLT3P36888 993 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 NUMBP49757 651 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 KLK7P49862 253 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 DNA2P51530 1060 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 CCNHP51946 323 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-216ENST00000512683 TMPRSS3P57727 454 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 CLDN2P57739 230 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 ARF5P84085 180 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 MAPK8IP2Q13387 824 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-216ENST00000512683 FGL2Q14314 439 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 ISXQ2M1V0 245 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 TAF3Q5VWG9 929 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 STRADAQ7RTN6 431 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 PTAR1Q7Z6K3 402 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-216ENST00000512683 OR2AP1Q8NGE2 309 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 IFI44Q8TCB0 444 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 GRIN3AQ8TCU5 1115 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 EPS8L1Q8TE68 723 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 NAT6Q93015 286 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 GBP4Q96PP9 640 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 IL12RB2Q99665 862 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 MYOCQ99972 504 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 TNKS2Q9H2K2 1166 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 TMEM248Q9NWD8 314 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 DONSONQ9NYP3 566 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 NOCTQ9UK39 431 aaKnown RBP12.78□□□□□ -0.36
VEGFA-216ENST00000512683 FLNBO75369 2602 aaKnown RBP12.78□□□□□ -0.36
VEGFA-216ENST00000512683 CHD5Q8TDI0 1954 aa12.78□□□□□ -0.36
VEGFA-216ENST00000512683 ARID1BQ8NFD5 2236 aaPredicted RBP12.77□□□□□ -0.36
VEGFA-216ENST00000512683 PTPRQQ9UMZ3 2332 aa12.77□□□□□ -0.36
VEGFA-216ENST00000512683 LY6G6EA0A0G2JKS1 128 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 FAM170AA1A519 330 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 TMEM110-MUSTN1A8MSY1 372 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 TMX2-CTNND1H3BSU7 103 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 NEMP1O14524 444 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 EPHB6O15197 1021 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 CD160O95971 181 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 MMEP08473 750 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 JUNDP17535 347 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 RBMS1P29558 406 aaKnown RBP12.77□□□□□ -0.37
VEGFA-216ENST00000512683 PEX5P50542 639 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 BLKP51451 505 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 JAM2P57087 298 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 GABREP78334 506 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 CCDC173Q0VFZ6 552 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 NR0B2Q15466 257 aa12.77□□□□□ -0.37
VEGFA-216ENST00000512683 MYLK3Q32MK0 819 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms