RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 SERINC5Q86VE9 423 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 SPATA22Q8NHS9 363 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 KCTD4Q8WVF5 259 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 MFSD3Q96ES6 412 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 CATSPER2Q96P56 530 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 THUMPD3Q9BV44 507 aaKnown RBP13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 ATP13A3Q9H7F0 1226 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 PLK2Q9NYY3 685 aa13.25□□□□□ -0.29
PCDHA4-202ENST00000512229 MATN3O15232 486 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 EDF1O60869 148 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 ZNF865P0CJ78 1059 aaPredicted RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 TFEBP19484 476 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 MSH3P20585 1137 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 PTPN3P26045 913 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 CDC25CP30307 473 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 PBX3P40426 434 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 TTPAP49638 278 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 BOP1Q14137 746 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 FAM45BPQ6NSW5 357 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 DEFB107AQ8IZN7 70 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 KYQ8NBH2 561 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 FAM45AQ8TCE6 357 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 TLCD1Q96CP7 247 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 BTBD10Q9BSF8 475 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 CHKBQ9Y259 395 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 ACSL4O60488 711 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 SYNCRIPO60506 623 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 METTL18O95568 372 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 PLIN5Q00G26 463 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 PRSS55Q6UWB4 352 aaPredicted RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 PIWIL4Q7Z3Z4 852 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 METTL3Q86U44 580 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 RTL3Q8N8U3 475 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 METTL6Q8TCB7 284 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 TMEM159Q96B96 161 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 MS4A4AQ96JQ5 239 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 TEKT5Q96M29 485 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 ACOX2Q99424 681 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 RHOBTB2Q9BYZ6 727 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 ELOVL6Q9H5J4 265 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 VWA7Q9Y334 891 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 BIRC5O15392 142 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 FAM155BO75949 473 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 OR56A5P0C7T3 313 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 HOXA11P31270 313 aaPredicted RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 NRLP54845 237 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 OASLQ15646 514 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 TRIP4Q15650 581 aaPredicted RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 STXBP5Q5T5C0 1151 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 C17orf99Q6UX52 265 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 HFE2Q6ZVN8 426 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 TDRPQ86YL5 185 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 GPSM1Q86YR5 675 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 NKAPQ8N5F7 415 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 ASB2Q96Q27 587 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 HAPLN3Q96S86 360 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 ANLNQ9NQW6 1124 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 SPASTQ9UBP0 616 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 LGALS13Q9UHV8 139 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 RABGEF1Q9UJ41 708 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 SLC4A7Q9Y6M7 1214 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 N4BP2Q86UW6 1770 aaPredicted RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 CCNT2O60583 730 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 STBD1O95210 358 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 SKIV2L2P42285 1042 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 CCNG1P51959 295 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 POLE2P56282 527 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 GALNT3Q14435 633 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 SLC1A5Q15758 541 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 PFKFB4Q16877 469 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 RNF43Q68DV7 783 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 OMDQ99983 421 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 SPATA16Q9BXB7 569 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 BBS2Q9BXC9 721 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 SLC25A51Q9H1U9 297 aa13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 HBS1LQ9Y450 684 aaKnown RBP13.24□□□□□ -0.29
PCDHA4-202ENST00000512229 FOXO6A8MYZ6 492 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 MT-CYBP00156 380 aaPredicted RBP13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 KRT6AP02538 564 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 KRT6BP04259 564 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 PBLDP30039 288 aaPredicted RBP13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 KRT6CP48668 564 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 KLC1Q07866 573 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 IRF5Q13568 498 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 PTK2BQ14289 1009 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 TTC7BQ86TV6 843 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 FAM9CQ8IZT9 166 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 ZDHHC6Q9H6R6 413 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 NMRK1Q9NWW6 199 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 XPR1Q9UBH6 696 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 APPL1Q9UKG1 709 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 MYO5AQ9Y4I1 1855 aaKnown RBP13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 SCN7AQ01118 1682 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 CYP2A6P11509 494 aaPredicted RBP13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 COL6A1P12109 1028 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 PROZP22891 400 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 VHLP40337 213 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 GABRB2P47870 512 aa13.23□□□□□ -0.29
PCDHA4-202ENST00000512229 TRMT5Q32P41 509 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms