RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 MTBPQ96DY7 904 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 NUDCD1Q96RS6 583 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 SEMA3CQ99985 751 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 FICDQ9BVA6 458 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 CERS4Q9HA82 394 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 PLAC1Q9HBJ0 212 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 SSU72Q9NP77 194 aaKnown RBP15.41■□□□□ 0.06
SCLT1-209ENST00000511426 NSMCE4AQ9NXX6 385 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 RPS6KL1Q9Y6S9 549 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 PAPSS2O95340 614 aaPredicted RBP15.41■□□□□ 0.06
SCLT1-209ENST00000511426 MMP2P08253 660 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 PAMP19021 973 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 ADRA1DP25100 572 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 CSKP41240 450 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 CD86P42081 329 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 DSC2Q02487 901 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 SULT2A1Q06520 285 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 MGAT5Q09328 741 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 NIPAL4Q0D2K0 466 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 DNAJC3Q13217 504 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 MTM1Q13496 603 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 MARK2Q7KZI7 788 aaKnown RBP15.41■□□□□ 0.06
SCLT1-209ENST00000511426 PGBD5Q8N414 524 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 PPHLN1Q8NEY8 458 aaKnown RBP15.41■□□□□ 0.06
SCLT1-209ENST00000511426 IRF7Q92985 503 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 E2F7Q96AV8 911 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 CERS2Q96G23 380 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 TRPV4Q9HBA0 871 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 SPHK2Q9NRA0 654 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 UBP1Q9NZI7 540 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 CCL26Q9Y258 94 aa15.41■□□□□ 0.06
SCLT1-209ENST00000511426 HEATR9A2RTY3 570 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 SRRM3A6NNA2 597 aaPredicted RBP15.4■□□□□ 0.06
SCLT1-209ENST00000511426 INSIG1O15503 277 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 USP12O75317 370 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 PMPCBO75439 489 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 KRT37O76014 449 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 KRT38O76015 456 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 PRAMEF12O95522 483 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 ALADP13716 330 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 CSNK1DP48730 415 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 NTHL1P78549 312 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 TMED2Q15363 201 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 SLC1A5Q15758 541 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 PLEKHG6Q3KR16 790 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 ANKRD20A4Q4UJ75 823 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 FSCBQ5H9T9 825 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 ZNF697Q5TEC3 545 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 PKN3Q6P5Z2 889 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 TRABD2AQ86V40 505 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 EXOC3L1Q86VI1 746 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 DCAKDQ8WVC6 231 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 IFT43Q96FT9 208 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 VPS51Q9UID3 782 aa15.4■□□□□ 0.06
SCLT1-209ENST00000511426 SMG5Q9UPR3 1016 aaKnown RBP15.4■□□□□ 0.06
SCLT1-209ENST00000511426 NUP210Q8TEM1 1887 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-209ENST00000511426 TMCC1O94876 653 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 KRT15P19012 456 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 FSHRP23945 695 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 MZF1P28698 734 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-209ENST00000511426 HPDP32754 393 aaPredicted RBP15.39■□□□□ 0.05
SCLT1-209ENST00000511426 SERPINH1P50454 418 aaKnown RBP15.39■□□□□ 0.05
SCLT1-209ENST00000511426 MAXP61244 160 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 AP1S1P61966 158 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 CDK18Q07002 472 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 CYTH1Q15438 398 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 PDPK2PQ6A1A2 396 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.39■□□□□ 0.05
SCLT1-209ENST00000511426 SPOCK2Q92563 424 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 CENPTQ96BT3 561 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 LMLNQ96KR4 655 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 ABCB8Q9NUT2 735 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 RIMKLBQ9ULI2 386 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 TCAF1Q9Y4C2 921 aa15.39■□□□□ 0.05
SCLT1-209ENST00000511426 TMEM265A0A087WTH1 108 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 ZCWPW2A0A1B0GU75 182 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 ATP9BO43861 1147 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 SHOX2O60902 331 aaPredicted RBP15.38■□□□□ 0.05
SCLT1-209ENST00000511426 NDST3O95803 873 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 GBP2P32456 591 aaPredicted RBP15.38■□□□□ 0.05
SCLT1-209ENST00000511426 LMAN2Q12907 356 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 FAM182AQ5T1J6 154 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 CERCAMQ5T4B2 595 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 TMC5Q6UXY8 1006 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 TPGS1Q6ZTW0 290 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 CTAGE3PQ8IX95 158 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 NPAS3Q8IXF0 933 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 ITFG1Q8TB96 612 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 SMARCD2Q92925 531 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 ISG20Q96AZ6 181 aaKnown RBP15.38■□□□□ 0.05
SCLT1-209ENST00000511426 ZNF669Q96BR6 464 aaPredicted RBP15.38■□□□□ 0.05
SCLT1-209ENST00000511426 BBS2Q9BXC9 721 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 SMG9Q9H0W8 520 aaKnown RBP15.38■□□□□ 0.05
SCLT1-209ENST00000511426 SCUBE2Q9NQ36 999 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 ZFATQ9P243 1243 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 CTNNAL1Q9UBT7 734 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.38■□□□□ 0.05
SCLT1-209ENST00000511426 EPOPA6NHQ4 379 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 MUSKO15146 869 aa15.38■□□□□ 0.05
SCLT1-209ENST00000511426 PRPF4O43172 522 aaKnown RBP eCLIP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms