RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 PMPCBO75439 489 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 UBTFL6P0CB48 400 aaPredicted RBP18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 CCR10P46092 362 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 RAB27AP51159 221 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 PGGT1BP53609 377 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 XIAPP98170 497 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 CYLC2Q14093 348 aaPredicted RBP18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 HNRNPDQ14103 355 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 TAF1CQ15572 869 aaPredicted RBP18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 NXNQ6DKJ4 435 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 PDSS2Q86YH6 399 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 CPSF7Q8N684 471 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 EFCAB3Q8N7B9 438 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 HASPINQ8TF76 798 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 NXNL1Q96CM4 212 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 FTHL17Q9BXU8 183 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 MRPL46Q9H2W6 279 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 SLC24A3Q9HC58 644 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 ZDHHC7Q9NXF8 308 aa18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 G3BP2Q9UN86 482 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-228ENST00000509552 DLX3O60479 287 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 DUSP11O75319 330 aaKnown RBP18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 LYNP07948 512 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 RAG1P15918 1043 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 PAX3P23760 479 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 ADRA1AP35348 466 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 CD151P48509 253 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 CNGA3Q16281 694 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 LRRTM3Q86VH5 581 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 CEP97Q8IW35 865 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 GDPD5Q8WTR4 605 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 PKMYT1Q99640 499 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 PRKD2Q9BZL6 878 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 SMOC2Q9H3U7 446 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 SFMBT1Q9UHJ3 866 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 ADAMTS6Q9UKP5 1117 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 COL4A4P53420 1690 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 A0A087X1B8 175 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 ARHGEF37A1IGU5 675 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 M0QZQ0 153 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 SNUPNO95149 360 aaKnown RBP18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 PGK1P00558 417 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 HLA-DQB2P05538 268 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 SLC1A2P43004 574 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 CCNHP51946 323 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 SLC5A3P53794 718 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 GRIK3Q13003 919 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 SEPT6Q14141 434 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 ZNF460Q14592 562 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 LRRC36Q1X8D7 754 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 MANEALQ5VSG8 457 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 CXCL17Q6UXB2 119 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 KBTBD6Q86V97 674 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 SPATA2LQ8IUW3 424 aaPredicted RBP18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 LRRC49Q8IUZ0 686 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 CCNYL1Q8N7R7 359 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 OR10T2Q8NGX3 314 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 TMEM209Q96SK2 561 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 TSC22D3Q99576 134 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 AGO3Q9H9G7 860 aaKnown RBP18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 TBC1D13Q9NVG8 400 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 NCKIPSDQ9NZQ3 722 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 STK39Q9UEW8 545 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 SLC2A6Q9UGQ3 507 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 ASB3Q9Y575 518 aa18.15■□□□□ 0.5
CCHCR1-228ENST00000509552 MSI1O43347 362 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 ZNF623O75123 536 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 ARNTP27540 789 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 GRIK1P39086 918 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 LPCAT4Q643R3 524 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 ZNF470Q6ECI4 717 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 KIAA0930Q6ICG6 404 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 RNF111Q6ZNA4 994 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 SDCCAG8Q86SQ7 713 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 C2CD4AQ8NCU7 369 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 GABPB2Q8TAK5 448 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 SOCS4Q8WXH5 440 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 RSPH1Q8WYR4 309 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 CASP10Q92851 521 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 ZNF419Q96HQ0 510 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 MRPL57Q9BQC6 102 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 TRPV6Q9H1D0 765 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 NPHS1O60500 1241 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 RPLP2P05387 115 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 POU4F1Q01851 419 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 TUSC3Q13454 348 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 TRIP10Q15642 601 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 RNF220Q5VTB9 566 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 KDELC2Q7Z4H8 507 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 SERINC5Q86VE9 423 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 DSELQ8IZU8 1212 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 LSMEM2Q8N112 164 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 CATSPER2Q96P56 530 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 GPR78Q96P69 363 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 EBF3Q9H4W6 596 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 TREX1Q9NSU2 369 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 SPATS2LQ9NUQ6 558 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 BCAP29Q9UHQ4 241 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 PADI3Q9ULW8 664 aa18.14■□□□□ 0.49
CCHCR1-228ENST00000509552 MOCS2O96007 188 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms