RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 EIF6P56537 245 aaKnown RBP4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ARF3P61204 181 aaPredicted RBP4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ERVK-21P61565 698 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ARF1P84077 181 aaKnown RBP4.64□□□□□ -1.67
NIPBL-206ENST00000509429 GRIN1Q05586 938 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ENPEPQ07075 957 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 RALGDSQ12967 914 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 DNAJC3Q13217 504 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 VEPH1Q14D04 833 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 HERC3Q15034 1050 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 UBE3CQ15386 1083 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ZYXQ15942 572 aaKnown RBP4.64□□□□□ -1.67
NIPBL-206ENST00000509429 LEXMQ3ZCV2 418 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 FLYWCH1Q4VC44 716 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 C12orf60Q5U649 245 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 SHEQ5VZ18 495 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 CES4AQ5XG92 561 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 MRM1Q6IN84 353 aaKnown RBP4.64□□□□□ -1.67
NIPBL-206ENST00000509429 DENND5AQ6IQ26 1287 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 CYP4F22Q6NT55 531 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 CYB5D1Q6P9G0 228 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 KRT27Q7Z3Y8 459 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 BRAPQ7Z569 592 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 PHC2Q8IXK0 858 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 HACE1Q8IYU2 909 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 TCAIMQ8N3R3 496 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ANKFN1Q8N957 763 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ZBTB34Q8NCN2 500 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 Q8NFD4 153 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 OR9A1PQ8NGU1 263 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF461Q8TAF7 563 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF671Q8TAW3 534 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 TEX47Q8TBZ9 253 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 BTN2A2Q8WVV5 523 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 PTERQ96BW5 349 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF653Q96CK0 615 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 SPACA9Q96E40 222 aaPredicted RBP4.64□□□□□ -1.67
NIPBL-206ENST00000509429 PGBD1Q96JS3 809 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 EGLN2Q96KS0 407 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 TSNARE1Q96NA8 513 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 FAM111AQ96PZ2 611 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 SLC2A13Q96QE2 648 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 PKP4Q99569 1192 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 CDC6Q99741 560 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 CINPQ9BW66 212 aaPredicted RBP4.64□□□□□ -1.67
NIPBL-206ENST00000509429 SPATA9Q9BWV2 254 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 SENP6Q9GZR1 1112 aaPredicted RBP4.64□□□□□ -1.67
NIPBL-206ENST00000509429 MAGEH1Q9H213 219 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 RHBGQ9H310 441 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 PANK3Q9H999 370 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ERVMER34-1Q9H9K5 563 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 C12orf4Q9NQ89 552 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 DMRT3Q9NQL9 472 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 SLC35D1Q9NTN3 355 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 UBP1Q9NZI7 540 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 USP36Q9P275 1121 aaKnown RBP4.64□□□□□ -1.67
NIPBL-206ENST00000509429 SNX6Q9UNH7 406 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 SLC8A2Q9UPR5 921 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 CHMP2BQ9UQN3 213 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 DLGAP4Q9Y2H0 992 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 VIRMAQ69YN4 1812 aaKnown RBP4.64□□□□□ -1.67
NIPBL-206ENST00000509429 PLXNC1O60486 1568 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 SH3TC1Q8TE82 1336 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 ANKRD30AQ9BXX3 1397 aa4.64□□□□□ -1.67
NIPBL-206ENST00000509429 MYO5CQ9NQX4 1742 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 CLASP1Q7Z460 1538 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 RNF103-CHMP3A0A140T963 221 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 ARHGEF37A1IGU5 675 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 RNF103O00237 685 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 DVL2O14641 736 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 IFIT3O14879 490 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 TP73O15350 636 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 FOXP2O15409 715 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 RRP8O43159 456 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 TRAPPC3O43617 180 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 AP1G1O43747 822 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 PHF2O75151 1096 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 SMIM24O75264 130 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 GNA14O95837 355 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 IFNA14P01570 189 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 OPN1LWP04000 364 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 CLUP10909 449 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 RALAP11233 206 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 SELLP14151 372 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 PDCP20941 246 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 PDIA3P30101 505 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 ADSLP30566 484 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 ALDH3A1P30838 453 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 THPOP40225 353 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 ARCN1P48444 511 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 PTH2RP49190 550 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 STARP49675 285 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 PPP5CP53041 499 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 MFAP3P55082 362 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 PRKCEQ02156 737 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 LGALS3BPQ08380 585 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 SMARCB1Q12824 385 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 CDC20Q12834 499 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 MAP4K2Q12851 820 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 KCNC3Q14003 757 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms