RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ARNTL2Q8WYA1 636 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 FCRL2Q96LA5 508 aaPredicted RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 AGAP3Q96P47 875 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 EBF4Q9BQW3 602 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 MRPL9Q9BYD2 267 aaKnown RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 FBXO44Q9H4M3 255 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 LRRC40Q9H9A6 602 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 PAPOLBQ9NRJ5 636 aaKnown RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 NDFIP2Q9NV92 336 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 KLHL8Q9P2G9 620 aaPredicted RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 BCAP29Q9UHQ4 241 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 WASF2Q9Y6W5 498 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 FNDC1Q4ZHG4 1894 aaPredicted RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 OR6C75A6NL08 312 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 SLC22A2O15244 555 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 ADAM12O43184 909 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 MTSS1O43312 755 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 PEX1O43933 1283 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 BAG2O95816 211 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 RPL17P18621 184 aaKnown RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 DNAJB1P25685 340 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 SERPINB6P35237 376 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 PEX19P40855 299 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 MAGEA11P43364 429 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 RPL10AP62906 217 aaKnown RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 DUSP4Q13115 394 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 UBAP2LQ14157 1087 aaKnown RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 BRMS1LQ5PSV4 323 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 IZUMO2Q6UXV1 221 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 ARHGAP36Q6ZRI8 547 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 UBE2Q1Q7Z7E8 422 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 DHDDSQ86SQ9 333 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 LRRC43Q8N309 656 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 OR6Y1Q8NGX8 325 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 HDAC11Q96DB2 347 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 CERS2Q96G23 380 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 HAPLN3Q96S86 360 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 OSBPL2Q9H1P3 480 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 ZNF395Q9H8N7 513 aaPredicted RBP11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 ARHGAP26Q9UNA1 814 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 PCDHB12Q9Y5F1 795 aa11.18□□□□□ -0.62
SH3RF1-203ENST00000508685 RANBP2P49792 3224 aaKnown RBP11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 PLXNA3P51805 1871 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 SHROOM3Q8TF72 1996 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 KCNU1A8MYU2 1149 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 DFFAO00273 331 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 HOXA2O43364 376 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 ITM2AO43736 263 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 TBC1D4O60343 1298 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 USP12O75317 370 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 MGAT1P26572 445 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 ADSLP30566 484 aaPredicted RBP11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 CD68P34810 354 aaPredicted RBP11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 ZNF135P52742 658 aaPredicted RBP11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 SESN2P58004 480 aaPredicted RBP11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 ASPHQ12797 758 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 GPR17Q13304 367 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 MANEALQ5VSG8 457 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 PDPK2PQ6A1A2 396 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 ZCCHC23Q6ZST2 131 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 NECAB2Q7Z6G3 386 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 RASSF3Q86WH2 238 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 MIB1Q86YT6 1006 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 UNC5BQ8IZJ1 945 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 FBXO27Q8NI29 283 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 RDH11Q8TC12 318 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 VWCEQ96DN2 955 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 ZNF419Q96HQ0 510 aaPredicted RBP11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 SERPINB11Q96P15 392 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 TTC1Q99614 292 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 TTPALQ9BTX7 342 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 NSMCE4AQ9NXX6 385 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 BFARQ9NZS9 450 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 MPP6Q9NZW5 540 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 HS3ST4Q9Y661 456 aa11.17□□□□□ -0.62
SH3RF1-203ENST00000508685 MICAL3Q7RTP6 2002 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 TIMM44O43615 452 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 LYNP07948 512 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 PIM1P11309 404 aaPredicted RBP11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 YWHAQP27348 245 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 NPY2RP49146 381 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 ALDH7A1P49419 539 aaKnown RBP11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 CSE1LP55060 971 aaKnown RBP11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 EFEMP1Q12805 493 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 TAF10Q12962 218 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 PPP2R5DQ14738 602 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 RBBP5Q15291 538 aaKnown RBP11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 SMAD1Q15797 465 aaKnown RBP11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 CFAP157Q5JU67 520 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 PIK3R6Q5UE93 754 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 C16orf46Q6P387 395 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 ACAD11Q709F0 780 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 SDCCAG8Q86SQ7 713 aaPredicted RBP11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 C14orf80Q86SX3 495 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 SETD3Q86TU7 594 aaPredicted RBP11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 C10orf107Q8IVU9 208 aa11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
SH3RF1-203ENST00000508685 DPF3Q92784 378 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms